[Biojava-l] Simple Question - Creating a Java object (some form of Tree) from a Newick format file

Richard Holland holland at eaglegenomics.com
Fri Jun 19 17:56:15 UTC 2009

Biojava has a parser which understands Nexus files, including the
embedded Newick tree data. You could probably extract and modify the
Newick bits to run standalone. The Nexus code is written up here:



On Fri, 2009-06-19 at 18:37 +0100, JP wrote:
> Does anyone know of a tool to create a tree by parsing a Newick Tree format
> file in Java ?
> Is there anything in biojava to read this ?
> Many Thanks
> JP
> _______________________________________________
> Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-l
Richard Holland, BSc MBCS
Operations and Delivery Director, Eagle Genomics Ltd
T: +44 (0)1223 654481 ext 3 | E: holland at eaglegenomics.com

More information about the Biojava-l mailing list