[Biojava-l] Multiple Sequence Viewer

[Scooter Willis]

My plan is to model the multiple sequence viewer used in JALView. Sequence
name on the left to fire events when clicked. I also typically work with
large sequences so need both horizontal and vertical scroll which does not
appear to be in the current viewers. I do see support for viewing a range of
a sequence but nothing to scroll or I could be missing something on how the
current viewer would scroll not using a ScrollPane.

This should be something easy to do in BioJava based on the importance of
viewing multiple sequence alignments.

Thanks

Scooter Willis

On Thu, Feb 12, 2009 at 9:31 AM, Russ Kepler <russ at kepler-eng.com> wrote:

> On Thursday 12 February 2009 05:13:57 Scooter Willis wrote:
>
> > Before I finish the last 10% of what I think need to be done and always
> > takes the longest does a multiple sequence viewer exist in BioJava and I
> > can't find it?
>
> In mine I simply have a TranslatedSequencePanel with a MultiLineRenderer,
> the
> MLR having a renderer for each sequence or sequence element).  This gave me
> the control over the individual sequence display I needed for cursors and
> such.
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