[Biojava-l] ParseException when using interleaved Nexus file

David Johnson d.johnson at reading.ac.uk
Thu Aug 6 17:03:24 UTC 2009


Hi everyone,

A quick question about the BioJava Nexus parser. I've been trying to
use the Nexus file parser, simply by doing something like:

        NexusFileBuilder builder = new NexusFileBuilder();
        NexusFileFormat.parseFile(builder, f);

However, when parsing Nexus files that are interleaved, I get a ParseException.

Is there a way to setup the parser provided by BioJava to handle
interleaved Nexus files?

Thanks,
-David
-- 
David Johnson
School of Biological Sciences
University of Reading



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