[Biojava-l] Problem while parsing GenBank-like files and persiting them using Hibernate

Hilmar Lapp hlapp at gmx.net
Thu Apr 24 22:25:29 UTC 2008


Hi Andreas,

On Apr 24, 2008, at 3:26 AM, Andreas Dräger wrote:
> Or more generally, can I somehow read in an ontology (for instance  
> the GO), persist it in BioSQL and make use of the terms contained  
> therein?


in principle, you absolutely can. As for whether Biojava lets you do  
this I do not know but I would suppose yes. (BioPerl has a script  
load_ontology.pl in its Bioperl-db package that does this.)

Your other questions all seem Biojava-specific, so I'll leave them to  
the list and Mark & Richard.

	-hilmar
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