[Biojava-l] Chromatogram viewer

Russ Kepler russ at kepler-eng.com
Tue Aug 14 21:20:59 UTC 2007


On Tuesday 14 August 2007 11:44:23 King Jordan wrote:
> I would like to be able to display a specific sub-range of a chromatogram.
> For instance, I may have and abi or scf file with 1,000 bp and I would like
> to display only positions 200-400.  Is there some way to modify the abi or
> scf file with biojava to accomplish this?

It would be easier to simple use the standard TraceRenderer in a panel that 
limits the displayed range to the positions desired in the 
SequenceRenderContext that's passed to the renderers.  I don't have an 
example handy but could hack something up if it'd help.




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