[Biojava-l] use NCBISequenceDB without gi AC

Titi cezard at nokad-technology.com
Wed Sep 20 10:18:06 UTC 2006


Hello,

I'm quite new with biojava and need to retrieve Sequence from NCBI.
I've got Blast result containing accession number but this are from their
original database.
for example
dbj|BAC25242.1
gb|AAQ88642.1
emb|CAC08176.1

Is their any solution to transforme this accession number into gi ones so I
could use NCBISequenceDB.
Or any solution to access a single database with all kind of accession
number.

any answers are welcome.

Thanks

Tim

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