[Biojava-l] Using Blast2HTML

[David Bourgais]

Hello

I would like to implement the Blast2HTML class.
But this method failed suring compilation :

public HTMLRenderer configureBlastN( PrintWriter poOut ) {
		
		SimpleAlignmentStyler oStyler = new SimpleAlignmentStyler
( SimpleAlignmentStyler.SHOW_ALL );
		String oRed = "FFA2A2";
		oStyler.addStyle( "-", oRed );
		oStyler.addStyle( "N", oRed );
		oStyler.addStyle( "A", oRed );
		oStyler.addStyle( "T", oRed );
		oStyler.addStyle( "C", oRed );
		oStyler.addStyle( "G", oRed );
		
		AlignmentMarker oAlignmentMarker = new AlignmentMarker
		( new ColourCommand() {
			public  boolean  isColoured
			(  String poFirst, String poSecond ) {
				
				if ( poFirst.equals( poSecond ) ) {
					return false;
				} else {
					return true;
				}
			}
		} // end ColourCommand
		, oStyler
		);
		
		Properties oProps = new Properties();
		oProps.put( "db", "nucl" );
		
		DefaultURLGeneratorFactory durlgf = new DefaultURLGeneratorFactory();
		
		HTMLRenderer oRenderer = new HTMLRenderer(poOut,
				this.oStyleDefinition,
				50,
				durlgf,
				oAlignmentMarker,
				oProps);
		
		return oRenderer;
	}

My compiler told me :
The constructor HTMLRenderer(PrintWriter, String, int,
DefaultURLGeneratorFactory, AlignmentMarker, Properties) is undefined

How can I solve this problem.

Thank you very much for answer.

Regards.

David Bourgais