[Biojava-l] Install question: classpath and use of jar files in compiling TestEmbl.java

[Tamas Horvath]

the easiest way is to put the jar files to the jdkxxx/jre/lib/extU may have to link them to your jre's same directory (shuld u use differentjre then the jdk's)
On 11/30/05, Travis Rodkey <trodkey at rice.edu> wrote:>> Hi - I am new to biojava and am trying to get it set up on Red Hat EE 3> running on a PC.   I have java 1.4.2 and jdk1.4.2.0 installed.>> I downloaded the necessary jar files (biojava1.4.jar, bytecode-0.92.jar,> commons-cli.jar, commons-collections-2.1.jar, commons-dbcp-1.1.jar,> commons-pool-1.1.jar) and placed them a /homes/trodkey/biojava directory> as per the "Getting Started" section.>> I then fixed the classpath variable to "setenv CLASSPATH> /homes/trodkey/biojava/biojava-> 1.4.jar:/homes/trodkey/biojava/bytecode-0.92.jar:> /homes/trodkey/biojava/commons-> cli.jar:/homes/trodkey/biojava/commons-collections-2.1.jar:> /homes/trodkey/biojava/commons-> dbcp-1.1.jar:/homes/trodkey/biojava/commons-pool-1.1.jar:."> as per the instructions.>> I then tried to compile TestEmbl.java as suggested in the "Getting> Started" section by using "javac> /homes/trodkey/biojava/demos/seq/TestEmbl.java", and got the error>> "/homes/trodkey/biojava/demos/seq/TestEmbl.java:5: package> homes.trodkey.biojava.org.biojava.bio does not exist", which was the> first of a string of 15 errors.>> Can anyone help me out?>> Thanks!>> -Travis Rodkey>> _______________________________________________> Biojava-l mailing list  -  Biojava-l at biojava.org> http://biojava.org/mailman/listinfo/biojava-l>