[Biojava-l] Issues with FlexibleAlignment

Russ Kepler russ at kepler-eng.com
Fri Nov 25 09:34:01 EST 2005

On Friday 25 November 2005 04:39 am, Matthew Pocock wrote:

> This should be returning the symbol AlphabetManager.getGap(), which should
> be the same as EMPTY_ALPHABET.getGap(). Could somebody fix this?

I wouldn't think that a gap symbol would be appropriate for the areas outside 
the sequence to sequence overlap.  Something that displays as a space or 
something would be a lot more appropriate, but my lack of experience in the 
Symbol package prevents me from finding it.

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