[Biojava-l] field names in term_synonym

bradford powell bradford.powell at gmail.com
Tue Jul 5 15:33:10 EDT 2005


org.biojava.bio.seq.db.biosql.OntologySQL refers to the 'name' field
of the table 'term_synonym'. The field is only called 'name' in the
hsqldb schema; it is called 'synonym' in the other schemas
(postgresql, mysql, oracle).

It seems that the references to 'name' should be changed to 'synonym'
in lines 305 and 577 of OntologySQL, and that the hsqldb schema be
corrected to follow the naming schema of the others.

-- Bradford Powell



More information about the Biojava-l mailing list