[Biojava-l] Location output
    mmatilai at hytti.uku.fi 
    mmatilai at hytti.uku.fi
       
    Thu Apr 14 06:58:20 EDT 2005
    
    
  
Hi!
I have added features to a sequence file using StrandedFeature.Template as a
template and RangeLocation class to define the locations. The sequence is saved
in Genbank format after the addition of all features. I want to output the
features later to a text file and this is how they look (type and location shown):
ER9_rc	[15276,15296]
I would like to get rid of the [] brackets.
I modified the toString method of the RangeLocation class and removed these
brackets but after this I get an error message as the program tries to write the
features added to the genbank file using GenbankFormat class method
writeSequence. Does anyone have an explanation to this? Or a simple solution how
I can simplify my text file output to leave out the brackets?
Thanx,
Merja Matilainen
    
    
More information about the Biojava-l
mailing list