[Biojava-l] Parse Genbank file

[Xingen Zhu]

Hi all,
 I am a new user of biojava.  I use the following java program to parse a genebank file:
  import java.util.*;
import java.io.*;
 
import org.biojava.bio.*;
import org.biojava.bio.symbol.*;
import org.biojava.bio.seq.*;
import org.biojava.bio.seq.io.*;
 
public class biojava {
 
 public static void main(String[] args) {
  try {
        File genbankFile = new File("e:\\java\\gb.txt"); 
        BufferedReader gReader = new BufferedReader(new 
          InputStreamReader(new FileInputStream(genbankFile)));
       GenbankFormat gFormat = new GenbankFormat();
       Alphabet alpha = DNATools.getDNA();
    
  } catch (Throwable t) {
      t.printStackTrace();
      System.exit(1); 
 }
 
}
}
 
 
This program can be compiled, but not run. The error message is
 Java.lang.NoClassDefFoundError
 
If delete the following line
Alphabet alpha = DNATools.getDNA();
 
It will complie and run 
 
Any idea?
 
Thanks a lot.
Michael




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