[Biojava-l] is blast parser flawed?

[mark.schreiber at group.novartis.com]

Hi -

The BlastLikeSAXParser checks the version of blast against a list it is 
known to support. If you call the .setModeLazy() method then the parser 
doesn't check the version. If you do this you should check the results 
carefully.

If people know of BLAST versions that the parser reads reliably could they 
let us know and we can add them to the list of supported versions.

- Mark





Magic Fang <fangl at genomics.org.cn>
Sent by: biojava-l-bounces at portal.open-bio.org
03/23/2004 09:22 AM

 
        To:     biojava-l at biojava.org
        cc: 
        Subject:        [Biojava-l] is blast parser flawed?


it seems that blast parser only check blast version on the first line of 
blast output, and i tricked her by changing the first line to 2.2.3, 
while i use version of 2.2.8.
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