[Biojava-l] BJIA updates

[mark.schreiber at group.novartis.com]

Hi All -

I have updated the BioJava in Anger site 
(http://www.biojava.org/docs/bj_in_anger/) adding some new tutorials and a 
bug fix.

Specifically, there are new tutorials on:

* Calculating mass and pI of a peptide 
(http://www.biojava.org/docs/bj_in_anger/calcmass.html)
* Creating a regular expression from a sequence motif 
(http://www.biojava.org/docs/bj_in_anger/regex.html) thanks to Andy Hammer 
for this sample!
* Performing a six frame translation 
(http://www.biojava.org/docs/bj_in_anger/sixframetranslate.html)

I have also fixed the bug in the view sequence demo 
(http://www.biojava.org/docs/bj_in_anger/NameChange.htm). This now uses 
the recommended API for generating ViewSequences.

Enjoy

- Mark

Mark Schreiber
Principal Scientist (Bioinformatics)

Novartis Institute for Tropical Diseases (NITD)
1 Science Park Road
#04-14 The Capricorn, Science Park II
Singapore 117528

phone +65 6722 2973
fax  +65 6722 2910