[Biojava-l] ask help in biojava GUI

wux at mail.cbi.pku.edu.cn wux at mail.cbi.pku.edu.cn
Fri Feb 27 01:48:44 EST 2004


Dear all:

    I have a question about biojava sequence GUI. I want to draw a lot of sequences in one panel with their features.
e.g: 

            m1           m2             m1         ( feature label on each feature)
           ----->      ---->          <-----       ( features : there are two motif1s and one motif2)
     seq1  ----------------------------------      ( this is the ruler)
           acgtaaaaacccggggtttttttttttttttttt      ( this is the real sequence)



            m1           m3           m1           ( feature label on each feature)
           ----->      ---->      <-----           ( features : there are two motif1s and one motif2)
     seq2  ----------------------------------      ( this is the ruler)
           acgtaaaaacccggggtaggaggttttttttttt      ( this is the real sequence)

     .............

I hope I can add each seq name in front of ruler , feature lable on top of the feature body , feature in different color according to its label and many sequences in one panel. How can I achieve that?
I have looked througth the biojava doc 1.3 carefully, but It seems that SequencePanel can only display one sequence.
The MultiLineRenderer can not resolve this either. Who can give me a hand ? Thanks in advance.


¡¡¡¡

¡¡¡¡¡¡¡¡¡¡¡¡              
 				          Yours faithfully,
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡     wux
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡     wux at mail.cbi.pku.edu.cn
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡    2004-02-27
*****************************************************
WuXin  Ph.D student of CBI (Center of Bioinformatics)
Peking University  100871 P.R.China
Email: wux at mail.cbi.pku.edu.cn
Tel: 010-62762409 (dorm)
     010-62755206 (office)
Address: Building 47#2026 Peking University
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