[Biojava-l] Unigene and Biosql

andrew at anatomy.otago.ac.nz andrew at anatomy.otago.ac.nz
Fri Sep 26 17:42:00 EDT 2003


Hi Michael,

Thanks Michael. Yes I'm aware that you can input with Perl and extract
with Java. I'm just interested in whether the input can also be done with
Java so I could, for example, do it from within an application.

-- Andrew.



> Hello Andrew,
>
> The biosql database is meant to be language neutral, so if you import a
> sequence into biosql db with the perl script, biojava should pull it out
> just fine.
>
>    michael
>
> On Fri, 26 Sep 2003, Andrew Macgregor wrote:
>
>> Hi,
>>
>> Has anyone got something using biojava that is equivalent to the
>> load_seqdatabase.pl script that comes with bioperl-db? That is
>> something that will allow me to load a unigene file into a biosql db
>> using biojava?
>>
>> Cheers, Andrew.
>>
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