[Biojava-l] Biojava GUI and Applets

[Schreiber, Mark]

Hi -
 
It may also be that you compiled biojava without using Ant. If this is the case you need to place the files in biojava-live/resources into your classpath.
 
- Mark

	-----Original Message----- 
	From: Matthew Pocock [mailto:matthew_pocock at yahoo.co.uk] 
	Sent: Fri 19/09/2003 1:59 a.m. 
	To: lach at cantv.net 
	Cc: biojava-l 
	Subject: Re: [Biojava-l] Biojava GUI and Applets
	
	

	Hi,
	
	If you remove biojava.jar either from the web server or from the applet
	tags, do you get exactly the same error? If so, then it looks like the
	applet's path is not being searched. What is the tag you are using to
	load the applet?
	
	Matthew
	
	
	lach at cantv.net wrote:
	
	>Hi,
	>
	>I updated Java Plugin, it didn't work.
	>
	>I could notice the following exceptions through Java Console:
	>
	>org.biojava.bio.BioError: Couldn't locate AlphabetManager.xml. This
	>probably means that your biojava.jar file is corrupt or incorrectly built
	>rethrown as org.biojava.bio.BioError: Unable to initialize DNATools
	>...
	>
	>AND
	>
	>java.lang.NoClassDefFoundError
	>at org.biojava.bio.seq.io.SeqIOTools.getDNAParser(SeqIOTools.java:907)
	>...
	>at org.biojava.bio.seq.io.SeqIOTools.fileToBiojava(SeqIOTools.java:787)
	>...
	>
	>I replaced biojava.jar, exceptions remain
	>
	>Where should I put .jar files to run my applet properly?
	>
	>
	>One more time, Thanks
	>
	>
	>Luis Ch.
	>lach at cantv.net                        
	>
	>_______________________________________________
	>Biojava-l mailing list  -  Biojava-l at biojava.org
	>http://biojava.org/mailman/listinfo/biojava-l
	>
	> 
	>
	
	
	_______________________________________________
	Biojava-l mailing list  -  Biojava-l at biojava.org
	http://biojava.org/mailman/listinfo/biojava-l
	


=======================================================================
Attention: The information contained in this message and/or attachments
from AgResearch Limited is intended only for the persons or entities
to which it is addressed and may contain confidential and/or privileged
material. Any review, retransmission, dissemination or other use of, or
taking of any action in reliance upon, this information by persons or
entities other than the intended recipients is prohibited by AgResearch
Limited. If you have received this message in error, please notify the
sender immediately.
=======================================================================