[Biojava-l] Question about Swiss-Prot parsing

[Vasa Curcin]

Hello,

I am parsing some Swiss-Prot files with Biojava 1.3 and need to put the 
contents into Sequence Collections. It does not crash but there are two 
problems:

1. Each annotation is shown as the tag, followed by a colon and then the 
content, so for example AC :Q9L867. Other parsers seem to be happy to 
convert the tags into meaningful description, is there some inherent 
problem with SWISS-PROT?

2. Features are not recognized in most cases.

Has anyone found workarounds for these.

Cheers,
Vasa