[Biojava-l] hmm profile comparison

[Schreiber, Mark]

If you want to see if two profiles have the same parameters you can get the Distributions from each state and use the DistributionTools.areEmissionSpectraEqual() method to tell you if they are the same. You should also test that the Distribution that holds the transitions is equal.
 
- Mark
 

	-----Original Message----- 
	From: Kirill Petrov [mailto:KPetrov at ics.uci.edu] 
	Sent: Sun 2/11/2003 8:44 a.m. 
	To: biojava-l at biojava.org 
	Cc: 
	Subject: [Biojava-l] hmm profile comparison
	
	

	Hello All,
	
	is there a way to compare 2 existing hmm profiles using biojava api?
	Or probably there is another type of profiling system that allows
	comparisons of the profiles rather than sequences?
	
	Kirill
	
	_______________________________________________
	Biojava-l mailing list  -  Biojava-l at biojava.org
	http://biojava.org/mailman/listinfo/biojava-l
	


=======================================================================
Attention: The information contained in this message and/or attachments
from AgResearch Limited is intended only for the persons or entities
to which it is addressed and may contain confidential and/or privileged
material. Any review, retransmission, dissemination or other use of, or
taking of any action in reliance upon, this information by persons or
entities other than the intended recipients is prohibited by AgResearch
Limited. If you have received this message in error, please notify the
sender immediately.
=======================================================================