[Biojava-l] hmm profile comparison
mark.schreiber at agresearch.co.nz
Sat Nov 1 16:29:06 EST 2003
If you want to see if two profiles have the same parameters you can get the Distributions from each state and use the DistributionTools.areEmissionSpectraEqual() method to tell you if they are the same. You should also test that the Distribution that holds the transitions is equal.
From: Kirill Petrov [mailto:KPetrov at ics.uci.edu]
Sent: Sun 2/11/2003 8:44 a.m.
To: biojava-l at biojava.org
Subject: [Biojava-l] hmm profile comparison
is there a way to compare 2 existing hmm profiles using biojava api?
Or probably there is another type of profiling system that allows
comparisons of the profiles rather than sequences?
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