[Biojava-l] Multiple Sequence Alignment Viewer

[Chris Zmasek]

Thanks for advertising ATV!

Unfortunately, ATV is a tree viewer and can not display multiple alignments.

Christian




> -----Original Message-----
> From: Can Tran [mailto:can at ucsd.edu]
> Sent: Wednesday, May 07, 2003 4:34 PM
> To: biojava-l at biojava.org
> Subject: Re: [Biojava-l] Multiple Sequence Alignment Viewer
> 
> 
> Hi Nathan,
> You can use ATV
> http://www.genetics.wustl.edu/eddy/atv/
> 
> Best wishes,
> Can
> 
> 
> 
> At 2:33 PM -0700 5/7/03, Nathan Whitehouse wrote:
> >Dear all,
> >
> >   I've used biojava on and off for some time, and I've
> >always found it useful.
> >
> >   I'm not sure how to proceed with my current problem,
> >though I'm sure someone has done it already.
> >
> >   I basically need a way to visualize a set of
> >sequences which need to be aligned.
> >
> >   Can anybody point me in the right direction on this?
> >   Is there an easy tool to visualize multiple
> >alignments?
> >
> >   Thanks a bunch,
> >
> >   Nathan Whitehouse
> >   Baylor College of Medicine
> >   Shaw Lab
> >   Houston, TX
> >
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