[Biojava-l] how to use BlastXMLParser

Russell Smithies russell.smithies at xtra.co.nz
Tue Jun 24 11:34:44 EDT 2003


Thanx  :-)
I just noticed there is a BlastXMLParser but haven't looked at it yet.  I
also noticed most of the docs have zero length .html files so browsing the
documentation is a little difficult  :-)

Russell



----- Original Message -----
From: "David Huen" <david.huen at ntlworld.com>
To: <jinchen at ufl.edu>; <biojava-l at biojava.org>;
<russell.smithies at xtra.co.nz>
Cc: <td2 at sanger.ac.uk>
Sent: Tuesday, June 24, 2003 10:06 AM
Subject: Re: [Biojava-l] how to use BlastXMLParser


> On Monday 23 Jun 2003 7:07 am, jinchen at ufl.edu wrote:
> > Greetings,
> >
> > I wonder how to use BlastXMLParser? I don't know where I can set my XML
> > filename and how to get parser result. Where can I get a sample file
> > using BlastXMLParser?
> >
> OK, I will write an example for this parser.
>
> I noticed that JAXP has come out since the last time I handled this code.
> Does StAX work with the preferred JAXP 1.0 style of XML parsing yet (ie.
> DefaultHandler or HandlerBase derived adaptor class)?  If so, I really
> should do it in the new style rather than the old way of doing SAX
parsing.
>
> Regards,
> David Huen
>
>




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