[Biojava-l] bug with SeqIOTools.readFastaDNA?

[Karin Lagesen]

I am using the SeqIOTools.readFastaDNA() method to get hold sequences
which are stored in a file. These are as far as I can tell in the
correct fasta format. However, whenever the fasta description line
contains a paranthesis, like this for instance:

>(gi|16127994:1080570-1080686, 1080677-1081408)

this sequence does not get read. Is this a bug or is it a feature? And
if it is a feature, could somebody tell me how to work around it?

TIA,

Karin
-- 
Karin Lagesen, PhD student
karin.lagesen at labmed.uio.no