[Biojava-l] writing SCF

Eckhard Lehmann elehmann at e-lehmann.de
Sat Jul 12 16:19:31 EDT 2003


Hi,

Shameek Chakravarty schrieb:
> Hi,
> 
> I cant see any support for *writing* SCF or ABI files.
> Is there a module in works for the same ?

in BioPerl there is a module for writing SCF files. Sometimes ago I read 
the code and modified it for any purposes of my own...
If you want do implement the SCF writing support in BioJava and are a 
little familiar with Perl, take a look at the module Bio::SeqIO::scf.pm 
in BioPerl.
But writing ABI files is hard...

Eckhard




More information about the Biojava-l mailing list