[Biojava-l] You major CVD commit

[Sylvain Foisy]

Hi,

I did my daily cvs update stuff and collected the mods that you described in
the mailing list. I end up with these errors:

[javac] Compiling 49 source files to
/Users/foisys/biojava-live/ant-build/classes/main
    [javac] 
/Users/foisys/biojava-live/ant-build/src/main/org/biojava/bio/seq/impl/RevCo
mpSequence.java:47: reference to ProjectedFeatureHolder is ambiguous, both
class org.biojava.bio.seq.projection.ProjectedFeatureHolder in
org.biojava.bio.seq.projection and class
org.biojava.bio.seq.ProjectedFeatureHolder in org.biojava.bio.seq match
    [javac]     private ProjectedFeatureHolder pfh;
    [javac]             ^
    [javac] 
/Users/foisys/biojava-live/ant-build/src/main/org/biojava/bio/seq/impl/RevCo
mpSequence.java:63: reference to ProjectedFeatureHolder is ambiguous, both
class org.biojava.bio.seq.projection.ProjectedFeatureHolder in
org.biojava.bio.seq.projection and class
org.biojava.bio.seq.ProjectedFeatureHolder in org.biojava.bio.seq match
    [javac]         pfh = new ProjectedFeatureHolder(new
TranslateFlipContext(seq,this,seq.length()+1,true));
    [javac]                   ^
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -deprecation for details.
    [javac] 2 errors

Any idea?

Sylvain

===================================================================
Sylvain Foisy, Ph. D.
Directeur - operations / Project Manager
BioneQ - Reseau quebecois de bio-informatique
U. de Montreal / Genome-Quebec

Adresse postale:

Departement de biochimie
Pavillon principal
2900, boul. Édouard-Montpetit
Montréal (Québec) H3T 1J4

Tel: (514) 343-6111 x.4066
Courriel: sylvain.foisy at bioneq.qc.ca
===================================================================