[Biojava-l] OrderNDistributions

[Schreiber, Mark]

> Hi,
> 
> Does anyone have some sample code on how to use the higher 
> order distributions? I'm not quite sure on how to make the 
> count works there.
>

There is some stuff in DistributionTools which details how a random sequence is produced using an orderNDistribution. I think the method is called createRandomSequence.
 
> Also, is there any code to evaluate the probability of a 
> sequence given a distribution? If not, where should it be 
> added (which class) if I was to put it in there?
> 

Probably in DistributionTools. That's where most of this ends up.

- Mark

> Thanks,
> 
> François
> 
> "I know life isn't fair, but why can't it ever be un-fair in 
> MY favor!?"
>                   Calvin (Calvin & Hobbes)
> 
> 
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