[Biojava-l] Re: Running apps with Java

hg6800 Markus.Roth at tg.fh-giessen.de
Mon Aug 18 03:31:52 EDT 2003


I had implemented classes for running apps with java with propertie files,
but your code is pretty cool stuff.
I thing I try to change my code to the way you do !

Max

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Betreff: Biojava-l Digest, Vol 8, Issue 14

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Today's Topics:

   1. Re: Running apps with Java (Patrick McConnell)


----------------------------------------------------------------------

Message: 1
Date: Thu, 14 Aug 2003 15:11:10 -0400
From: "Patrick McConnell" <MCCon012 at mc.duke.edu>
Subject: Re: [Biojava-l] Running apps with Java
To: biojava-l at biojava.org
Message-ID:

<OFC4F8E187.D433086C-ON85256D82.006914AE-85256D82.006964D2 at notes.duke.edu>

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I have implemented LocalProgram which runs programs based on an XML
description of the parameters.  Program IO is handled in separate threads.
Also, local resources, such as paths to executables and databases, can be
loaded from XML.  I have made the binaries, source, and documentation
available at:


http://www.dbsr.duke.edu/research/softwaredev/libraries/java/jprogram/defaul
t.aspx

I think this could be modified for use in BioJava.

Please comment on anything (including my poor coding skills ; - ),

-Patrick



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