[Biojava-l] ssaha

Schreiber, Mark mark.schreiber at agresearch.co.nz
Wed Apr 23 17:09:43 EDT 2003

Hi -
I have been using the ssaha package in biojava and it's really great, good work guys!!
I have one minor question, Am I correct in assuming that hits are reported only if a segment from the query sequence exactly matches a word in the seqstore? Does ssaha allow for partial matches?
- Mark

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