[Biojava-l] Distributions over infinite Alphabets

Matthew Pocock matthew_pocock at yahoo.co.uk
Thu Apr 17 13:26:34 EDT 2003


 --- "Schreiber, Mark"
<mark.schreiber at agresearch.co.nz> wrote: > Hi -
>  
> The Double Alphabet doesn't have the required
> method.

OK - it needs to be added.

> I'm not too clear on how you would make such a
> Symbol as it technically contains an infinite number
> of AtomicSymbols.

It has a getMatches() alphabet that is not finite.
getMatches() is the sub-alphabet of double from min to
max val.

Some 1st draft code will hit CVS in the next hour or
so that implements this. It needs fixing for
serialization and fly-weighting and things. I think
you did a grand job of fixing IntegerAlphabet for
these issues :) I've only modified DoubleAlphabet.

Matthew


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