[Biojava-l] "packed" SymbolLists?

Schreiber, Mark mark.schreiber@agresearch.co.nz
Thu, 24 Oct 2002 11:34:40 +1300

Hi -

There is a PackedSymbolList and a PackedDNASymbolList in
org.biojava.bio.symbol. Can't say I've used them but I think they
operate pretty much the same as normal SymbolLists.

- Mark

> -----Original Message-----
> From: Dave Barkan [mailto:dbarkan@snowball.pcbi.upenn.edu] 
> Sent: Thursday, 24 October 2002 11:24 a.m.
> To: biojava-l@biojava.org
> Subject: [Biojava-l] "packed" SymbolLists?
> Hey all,
> I saw in the tutorial on the Biojava home page that it is 
> possible to implement a "packed" symbolList that only uses 
> 2-4 bits per nucleotide. Is there a class available that 
> implements this yet?  (If not, what is the reasoning behind 
> this and would it be something I could easily set up and give 
> back to the community?)
> Thanks,
> dave
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