[Biojava-l] Ensembl read problems

Schreiber, Mark mark.schreiber@agresearch.co.nz
Tue, 26 Nov 2002 09:10:51 +1300


Hi -

My guess would be that line where it tries to join on a negative
location. That doesn't seem to make a whole lot of sense and suggests to
me an error in that record.

Can any embl experts confirm that?

- Mark


> -----Original Message-----
> From: saerts [mailto:saerts@mailserv.esat.kuleuven.ac.be] 
> Sent: Tuesday, 26 November 2002 12:10 a.m.
> To: biojava-l@biojava.org
> Subject: [Biojava-l] Ensembl read problems
> 
> 
> 
> Hello,
> I'm still experiencing problems when reading the EMBL 
> formatted output of the "export data" of Ensembl. Both for 
> human and mouse, although the parsing errors are different in 
> both cases. I'm using a BioJava CVS-build of last week
> 
> In one case, no features can be parsed (human).
> In the other case, some of the locations are out of the 
> source location (mouse).
> 
> I'm using the code and the sequences below, and the errors of 
> both cases are pasted in this mail.
> 
> Does anyone have an idea why this goes wrong?
> 
> Thanks!
> 
> Stein Aerts.
> 
> 
> ##################################
> code
> ###################################
> BufferedReader br = new BufferedReader(new FileReader("temp.embl"));
>     SequenceIterator stream = SeqIOTools.readEmbl(br);
>     Sequence seq = stream.nextSequence();
> 
> ##################################
> case 1: ccnd1_human.embl
> ###################################
> This line could not be parsed: CDS            
> join(-1151..-840,1654..1777,1995..2434)
> This line could not be parsed:                 12014..12175)
> This line could not be parsed: CDS            
> join(3927..4460,4728..4887,8890..9038,12014..12178)
> This line could not be parsed: exon            -1151..-840
> This line could not be parsed: exon            1654..1777
> This line could not be parsed: exon            1995..2434
> This line could not be parsed: exon            2001..2407
> This line could not be parsed: exon            3927..4460
> This line could not be parsed: exon            3927..4142
> This line could not be parsed: exon            4728..4887
> This line could not be parsed: exon            4728..4887
> This line could not be parsed: exon            8890..9038
> This line could not be parsed: exon            8890..9038
> This line could not be parsed: exon            12014..12178
> This line could not be parsed: exon            12014..15370
> This line could not be parsed: variation       complement(64..64)
> This line could not be parsed: variation       835..835
> This line could not be parsed: variation       838..838
> This line could not be parsed: variation       862..862
> This line could not be parsed: variation       1235..1235
> This line could not be parsed: variation       1579..1579
> This line could not be parsed: variation       1779..1779
> This line could not be parsed: variation       1948..1948
> This line could not be parsed: variation       2297..2297
> This line could not be parsed: variation       2365..2365
> This line could not be parsed: variation       2605..2605
> This line could not be parsed: variation       2612..2612
> This line could not be parsed: variation       2627..2627
> This line could not be parsed: variation       2634..2634
> This line could not be parsed: variation       2729..2729
> This line could not be parsed: variation       2777..2777
> This line could not be parsed: variation       2875..2875
> This line could not be parsed: variation       2878..2878
> This line could not be parsed: variation       3029..3029
> This line could not be parsed: variation       3421..3421
> This line could not be parsed: variation       4116..4116
> This line could not be parsed: variation       4117..4117
> This line could not be parsed: variation       4161..4161
> This line could not be parsed: variation       4177..4177
> This line could not be parsed: variation       5141..5141
> This line could not be parsed: variation       5174..5174
> This line could not be parsed: variation       5277..5277
> This line could not be parsed: variation       5539..5539
> This line could not be parsed: variation       6708..6708
> This line could not be parsed: variation       7310..7310
> This line could not be parsed: variation       7328..7328
> This line could not be parsed: variation       7341..7341
> This line could not be parsed: variation       7502..7502
> This line could not be parsed: variation       7518..7518
> This line could not be parsed: variation       7522..7522
> This line could not be parsed: variation       7859..7859
> This line could not be parsed: variation       8065..8065
> This line could not be parsed: variation       8118..8120
> This line could not be parsed: variation       8218..8218
> This line could not be parsed: variation       8314..8314
> This line could not be parsed: variation       8330..8330
> This line could not be parsed: variation       8548..8548
> This line could not be parsed: variation       8770..8770
> This line could not be parsed: variation       9038..9038
> This line could not be parsed: variation       9609..9609
> This line could not be parsed: variation       9807..9807
> This line could not be parsed: variation       10191..10191
> This line could not be parsed: variation       10482..10482
> This line could not be parsed: variation       10488..10488
> This line could not be parsed: variation       10513..10513
> This line could not be parsed: variation       10921..10921
> This line could not be parsed: variation       11025..11025
> This line could not be parsed: variation       11112..11112
> This line could not be parsed: variation       11221..11221
> This line could not be parsed: variation       11464..11464
> This line could not be parsed: variation       11534..11534
> This line could not be parsed: variation       11540..11540
> This line could not be parsed: variation       11635..11635
> This line could not be parsed: variation       11809..11809
> This line could not be parsed: variation       11988..11988
> This line could not be parsed: variation       12112..12112
> This line could not be parsed: variation       12243..12243
> This line could not be parsed: variation       12321..12321
> This line could not be parsed: variation       12865..12865
> This line could not be parsed: variation       12884..12884
> This line could not be parsed: variation       
> complement(12900..12900)
> This line could not be parsed: variation       13000..13000
> This line could not be parsed: variation       13012..13012
> This line could not be parsed: variation       13090..13090
> This line could not be parsed: variation       13294..13294
> This line could not be parsed: variation       13465..13465
> This line could not be parsed: variation       13779..13779
> This line could not be parsed: variation       14048..14048
> This line could not be parsed: variation       14095..14095
> This line could not be parsed: variation       14358..14358
> This line could not be parsed: variation       14486..14486
> This line could not be parsed: variation       14490..14490
> This line could not be parsed: variation       14504..14504
> This line could not be parsed: variation       14636..14636
> This line could not be parsed: variation       14714..14714
> This line could not be parsed: variation       14796..14796
> This line could not be parsed: variation       14904..14904
> This line could not be parsed: variation       14939..14939
> This line could not be parsed: variation       14966..14966
> This line could not be parsed: variation       15158..15158
> This line could not be parsed: variation       15273..15273
> This line could not be parsed: variation       15338..15338
> This line could not be parsed: variation       15346..15346
> This line could not be parsed: variation       15463..15463
> This line could not be parsed: variation       15556..15556
> This line could not be parsed: variation       15606..15606
> This line could not be parsed: variation       15677..15677
> This line could not be parsed: variation       15778..15782
> This line could not be parsed: variation       15880..15880
> This line could not be parsed: variation       15975..15975
> This line could not be parsed: variation       16031..16031
> This line could not be parsed: variation       16053..16053
> This line could not be parsed: variation       16062..16062
> This line could not be parsed: variation       16114..16114
> This line could not be parsed: variation       16421..16421
> This line could not be parsed: variation       16511..16511
> Chromosome|17370|gcctagtaac
> 
> ##################################
> case 2: ccnd1_mus.embl
> ###################################
> D:\JBuilder7\jdk1.3.1\bin\javaw -classpath 
> "D:\SAE\Projects\dvl\classes;D:\SAE\Projects\sista.sequence\Mo
> tifFinding\classes;D:\SAE\Projects\sista.sequence\SequenceView
> er\classes;D:\SAE\java\jars\mm.mysql-2.0.14-bin.jar;D:\SAE\jav
a\jars\servlet.jar;D:\SAE\java\data4s.clustering\clustering.jar;D:>
\SAE\java\jars\lapack\classes.zip;D:\SAE\java\jars\webwise\web
wisefree.jar;D:\JBuilder7\lib\xerces.jar;D:\SAE\java\jars\oro\jakarta->
oro-2.0.4\jakarta-oro-2.0.4.jar;D:\SAE\java\ensj\ensj.zip;D:\S
> AE\java\jars\jaxp.jar;D:\JBuilder7\lib\junit.jar;D:\JBuilder7\
> lib\unittest.jar;D:\Program
> Files\jython\jython.jar;D:\Program
> Files;D:\SAE\java\jars\soap.jar;D:\SAE\java\jars\activation.ja
> r;D:\SAE\java\jars\mail.jar;D:\SAE\java\jars\regexp\jakarta-re
gexp-1.2.jar;U:\Projects\biojava\biojava-ensembl\ant-build\bj->
ensembl.jar;U:\Projects\biojava\ensembl\ant-build\ensembl-j.ja
> r;U:\Projects\biojava\biojava-live\ant-build\biojava.jar;D:\JB
> uilder7\jdk1.3.1\demo\jfc\Java2D\Java2Demo.jar;D:\JBuilder7\jd
k1.3.1\jre\lib\i18n.jar;D:\JBuilder7\jdk1.3.1\jre\lib\jaws.jar;D:>
\JBuilder7\jdk1.3.1\jre\lib\rt.jar;D:\JBuilder7\jdk1.3.1\jre\l
> ib\sunrsasign.jar;D:\JBuilder7\jdk1.3.1\lib\dt.jar;D:\JBuilder
> 7\jdk1.3.1\lib\htmlconverter.jar;D:\JBuilder7\jdk1.3.1\lib\tools.jar"
>  -Xmx500m -Djdbc.drivers=org.gjt.mm.mysql.Driver ReadEmbl
> java.lang.IllegalArgumentException: Location [15972,16065] is 
> outside 1..12647
> 
>     at 
> org.biojava.bio.seq.impl.SimpleFeature.<init>(SimpleFeature.java:306)
> 
>     at
> org.biojava.bio.seq.impl.SimpleStrandedFeature.<init>(SimpleSt
randedFeature.java:74)
> 
>     at java.lang.reflect.Constructor.newInstance(Native Method)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:138)
> 
> rethrown as org.biojava.bio.BioException: Couldn't realize feature
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:144)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer.realizeFeature(Simpl
eFeatureRealizer.java:94)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.realizeFeature(SimpleS
> equence.java:199)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.createFeature(SimpleSe
> quence.java:205)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderBase.makeSequence(Sequen
> ceBuilderBase.java:168)
> 
>     at
> org.biojava.bio.seq.io.SimpleSequenceBuilder.makeSequence(Simp
> leSequenceBuilder.java:83)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderFilter.makeSequence(Sequ
> enceBuilderFilter.java:98)
> 
>     at 
> org.biojava.bio.seq.io.StreamReader.nextSequence(StreamReader.
> java:101)
> 
>     at ReadEmbl.main(ReadEmbl.java:19)
> 
> java.lang.IllegalArgumentException: Location 12061, 33547 
> {([12061,12216]), ([15972,16065]), ([33387,33547])} is 
> outside 1..12647
> 
>     at 
> org.biojava.bio.seq.impl.SimpleFeature.<init>(SimpleFeature.java:306)
> 
>     at
> org.biojava.bio.seq.impl.SimpleStrandedFeature.<init>(SimpleSt
randedFeature.java:74)
> 
>     at java.lang.reflect.Constructor.newInstance(Native Method)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:138)
> 
> rethrown as org.biojava.bio.BioException: Couldn't realize feature
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:144)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer.realizeFeature(Simpl
eFeatureRealizer.java:94)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.realizeFeature(SimpleS
> equence.java:199)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.createFeature(SimpleSe
> quence.java:205)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderBase.makeSequence(Sequen
> ceBuilderBase.java:168)
> 
>     at
> org.biojava.bio.seq.io.SimpleSequenceBuilder.makeSequence(Simp
> leSequenceBuilder.java:83)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderFilter.makeSequence(Sequ
> enceBuilderFilter.java:98)
> 
>     at 
> org.biojava.bio.seq.io.StreamReader.nextSequence(StreamReader.
> java:101)
> 
>     at ReadEmbl.main(ReadEmbl.java:19)
> 
> java.lang.IllegalArgumentException: Location [33387,33547] is 
> outside 1..12647
> 
>     at 
> org.biojava.bio.seq.impl.SimpleFeature.<init>(SimpleFeature.java:306)
> 
>     at
> org.biojava.bio.seq.impl.SimpleStrandedFeature.<init>(SimpleSt
randedFeature.java:74)
> 
>     at java.lang.reflect.Constructor.newInstance(Native Method)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:138)
> 
> rethrown as org.biojava.bio.BioException: Couldn't realize feature
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer$TemplateImpl.realize
> (SimpleFeatureRealizer.java:144)
> 
>     at
> org.biojava.bio.seq.SimpleFeatureRealizer.realizeFeature(Simpl
eFeatureRealizer.java:94)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.realizeFeature(SimpleS
> equence.java:199)
> 
>     at
> org.biojava.bio.seq.impl.SimpleSequence.createFeature(SimpleSe
> quence.java:205)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderBase.makeSequence(Sequen
> ceBuilderBase.java:168)
> 
>     at
> org.biojava.bio.seq.io.SimpleSequenceBuilder.makeSequence(Simp
> leSequenceBuilder.java:83)
> 
>     at
> org.biojava.bio.seq.io.SequenceBuilderFilter.makeSequence(Sequ
> enceBuilderFilter.java:98)
> 
>     at 
> org.biojava.bio.seq.io.StreamReader.nextSequence(StreamReader.
> java:101)
> 
>     at ReadEmbl.main(ReadEmbl.java:19)
> 
> Chromosome|12647|nnnnnnnnnn
> 
> ##################################
> ccnd1_human.embl
> ###################################
> 
> ID   Chromosome 11 71948701 to 71966070  ENSEMBL; DNA; HUM; 17370 BP.
> XX
> AC   Chromosome 11 71948701 to 71966070;
> XX
> SV   NO_SV_NUMBER
> XX
> DE   Reannotated sequence via Ensembl
> XX
> KW   HTG.
> XX
> OS   Homo sapiens (Human)
> OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; 
> Eutheria; Primates;
> OC   Catarrhini; Hominidae; Homo.
> XX
> CC   This sequence was reannotated via the Ensembl system. 
> Please visit the
> CC   Ensembl web site, http://www.ensembl.org/ for more information.
> XX
> CC   The reference, comment, description and feature table of 
> the original
> CC   entry can be found in the DDBJ/EMBL/GenBank database 
> with the identical
> CC   accession number.
> XX
> CC   The /gene indicates a unique id for a gene, /cds a 
> unique id for a
> CC   translation and a /exon a unique id for an exon. These 
> ids are maintained
> CC   wherever possible between versions. For more information 
> on how to
> CC   interpret the feature table, please visit
> CC   http://www.ensembl.org/Docs/embl.html.
> XX
> CC   All the exons and transcripts in Ensembl are confirmed 
> by similarity to
> CC   either protein or cDNA sequences.
> XX
> CC   In unfinished, rough draft DNA sequence gene structures can cross
> CC   fragments and, in these cases, the order and orientation 
> of the fragments
> CC   is likely to be different from the order in the the International
> CC   Nucleotide Sequence Databases DDBJ/EMBL/GenBank.
> XX
> FH   Key             Location/Qualifiers
> FH
> FT   source          1..17370
> FT                   /classification="sapiens, Homo, 
> Hominidae, Catarrhini,
> FT                   Primates, Eutheria, Mammalia, 
> Vertebrata, Chordata,
> FT                   Metazoa, Eukaryota"
> FT                   /organism="Human"
> FT   CDS             join(-1151..-840,1654..1777,1995..2434)
> FT                   /transcript="AP001824.4.1.124888.120532.124117"
> FT                   
> /translation="MGGAVRLSMCRACGCLGWALGPEFAPAHLAVLGRLGSALRKRSRA
> FT                   
> AIARGPPRAPQKQAVWGEGELERLRSPGAGFRKRFPGRLKGLTMENSRSLSQVLSSRRQ
> FT                   
> AACGLPAFLVVPYCRATSTSPPKSRGTHSRRTGPPAPLFPGVTSHGLQGSFVEVAKSWS
> FT                   
> LQRAVGAVAASSRVRTLRRGAEEREGARGSRSESRARTQPGPTALPSCPGRAPAMEHQL
> FT                   
> LCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWM
> FT                   LEVRGFGRLS"
> FT   CDS             join(2210..2407,3927..4142,4728..4887,8890..9038,
> FT                   12014..12175)
> FT                   /gene="ENSG00000110092"
> FT                   /cds="ENSP00000227507"
> FT                   /transcript="ENST00000227507"
> FT                   /db_xref="GO:GO:0000074"
> FT                   /db_xref="GO:GO:0005634"
> FT                   /db_xref="GO:GO:0008372"
> FT                   /db_xref="GO:GO:0016288"
> FT                   /db_xref="GO:GO:0016538"
> FT                   /db_xref="GO:GO:0000082"
> FT                   /db_xref="RefSeq:NM_053056"
> FT                   /db_xref="MIM:168461"
> FT                   /db_xref="LocusLink:595"
> FT                   /db_xref="HUGO:1582"
> FT                   /db_xref="RefSeq:NM_001758"
> FT                   /db_xref="LocusLink:893"
> FT                   /db_xref="SWISSPROT:P24385"
> FT                   /db_xref="EMBL:X59798"
> FT                   /db_xref="protein_id:CAA42470"
> FT                   /db_xref="EMBL:M74092"
> FT                   /db_xref="EMBL:M64349"
> FT                   /db_xref="protein_id:AAA52136"
> FT                   /db_xref="EMBL:M73554"
> FT                   /db_xref="protein_id:AAA58392"
> FT                   /db_xref="EMBL:Z23022"
> FT                   /db_xref="protein_id:CAA80558"
> FT                   /db_xref="EMBL:BC000076"
> FT                   /db_xref="protein_id:AAH00076"
> FT                   /db_xref="EMBL:BC001501"
> FT                   /db_xref="protein_id:AAH01501"
> FT                   /db_xref="EMBL:BC014078"
> FT                   /db_xref="protein_id:AAH14078"
> FT                   /db_xref="MIM:151400"
> FT                   
> /translation="MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYF
> FT                   
> KCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGA
> FT                   
> TCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEH
> FT                   
> FLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNN
> FT                   
> FLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEV
> FT                   DLACTPTDVRDVDI"
> FT   CDS             
> join(3927..4460,4728..4887,8890..9038,12014..12178)
> FT                   /transcript="AP001888.4.1.161505.2802.12770"
> FT                   
> /translation="VCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS
> FT                   
> KMKETIPLTAEKLCIYTDNSIRPEELLVTTGPRRPPPPASRTQDHGAGEGAGGGGRPAS
> FT                   
> DISAPPREGGPAAGRPCPGSGRDPSRPRPAALCALACDSHRVRAPRCGRKVGGARPPAA
> FT                   
> ARGAPRSALSLQFQVQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHA
> FT                   
> QTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDP
> FT                   
> DCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI"
> FT   exon            -1151..-840
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            1654..1777
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            1995..2434
> FT                   /exon_id=""
> FT                   /start_phase=1
> FT                   /end_phase=1
> FT   exon            2001..2407
> FT                   /exon_id="ENSE00001099159"
> FT                   /start_phase="-1"
> FT                   /end_phase="-1"
> FT   exon            3927..4460
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            3927..4142
> FT                   /exon_id="ENSE00001064288"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            4728..4887
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            4728..4887
> FT                   /exon_id="ENSE00000737399"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            8890..9038
> FT                   /exon_id=""
> FT                   /start_phase=1
> FT                   /end_phase=1
> FT   exon            8890..9038
> FT                   /exon_id="ENSE00000894874"
> FT                   /start_phase=1
> FT                   /end_phase=1
> FT   exon            12014..12178
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            12014..15370
> FT                   /exon_id="ENSE00000894873"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   variation       complement(64..64)
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1944129"
> FT                   /db_xref="TSC-CSHL:TSC1016673"
> FT                   /db_xref="HGBASE:SNP000218375"
> FT   variation       835..835
> FT                   /replace="T|G"
> FT                   /note="heterozygosity=0.0758316"
> FT                   /note="heterozygosity_std_error=0.0411453"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212859"
> FT   variation       838..838
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:954618"
> FT                   /db_xref="TSC-CSHL:TSC0069836"
> FT   variation       862..862
> FT                   /replace="C|T"
> FT                   /note="heterozygosity=0.0878642"
> FT                   /note="heterozygosity_std_error=0.0436568"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:954619"
> FT                   /db_xref="TSC-CSHL:TSC0069837"
> FT                   /db_xref="HGBASE:SNP000493743"
> FT   variation       1235..1235
> FT                   /replace="T|A"
> FT                   /note="heterozygosity=0.0772231"
> FT                   /note="heterozygosity_std_error=0.0387438"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212860"
> FT                   /db_xref="HGBASE:SNP000527181"
> FT   variation       1579..1579
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0253133"
> FT                   /note="heterozygosity_std_error=0.0248237"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212861"
> FT                   /db_xref="HGBASE:SNP001055438"
> FT   variation       1779..1779
> FT                   /replace="T|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017616"
> FT   variation       1948..1948
> FT                   /replace="A|C"
> FT                   /note="heterozygosity=0.0116949"
> FT                   /note="heterozygosity_std_error=0.0163939"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212862"
> FT                   /db_xref="HGBASE:SNP000108556"
> FT   variation       2297..2297
> FT                   /replace="G|T"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2220247"
> FT                   /db_xref="TSC-CSHL:TSC1283618"
> FT                   /db_xref="HGBASE:SNP000890098"
> FT   variation       2365..2365
> FT                   /replace="G|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2930976"
> FT   variation       2605..2605
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017617"
> FT   variation       2612..2612
> FT                   /replace="C|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2930977"
> FT                   /db_xref="HGBASE:SNP000454984"
> FT   variation       2627..2627
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017618"
> FT                   /db_xref="HGBASE:SNP000367599"
> FT   variation       2634..2634
> FT                   /replace="C|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017619"
> FT   variation       2729..2729
> FT                   /replace="A|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017620"
> FT                   /db_xref="HGBASE:SNP000140400"
> FT   variation       2777..2777
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2930978"
> FT   variation       2875..2875
> FT                   /replace="T|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2930979"
> FT   variation       2878..2878
> FT                   /replace="C|T"
> FT                   /note="heterozygosity=0.0342755"
> FT                   /note="heterozygosity_std_error=0.0272485"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212863"
> FT   variation       3029..3029
> FT                   /replace="C|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3017621"
> FT   variation       3421..3421
> FT                   /replace="C|T"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1352075"
> FT                   /db_xref="TSC-CSHL:TSC0484521"
> FT                   /db_xref="HGBASE:SNP000427023"
> FT   variation       4116..4116
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1050971"
> FT                   /db_xref="HGBASE:SNP001438239"
> FT   variation       4117..4117
> FT                   /replace="A|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1131439"
> FT                   /db_xref="HGBASE:SNP001423091"
> FT   variation       4161..4161
> FT                   /replace="G|C"
> FT                   /note="heterozygosity=0.0222195"
> FT                   /note="heterozygosity_std_error=0.0218437"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212864"
> FT                   /db_xref="HGBASE:SNP000173096"
> FT   variation       4177..4177
> FT                   /replace="CCCCCCG|-"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212865"
> FT                   /db_xref="HGBASE:SNP000553120"
> FT   variation       5141..5141
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0713305"
> FT                   /note="heterozygosity_std_error=0.0388588"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212866"
> FT                   /db_xref="HGBASE:SNP000220349"
> FT   variation       5174..5174
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0243872"
> FT                   /note="heterozygosity_std_error=0.0239333"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:616294"
> FT                   /db_xref="HGBASE:SNP000366177"
> FT   variation       5277..5277
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0917408"
> FT                   /note="heterozygosity_std_error=0.0424857"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212867"
> FT                   /db_xref="HGBASE:SNP000442103"
> FT   variation       5539..5539
> FT                   /replace="G|C"
> FT                   /note="heterozygosity=0.0285659"
> FT                   /note="heterozygosity_std_error=0.0279412"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212868"
> FT                   /db_xref="HGBASE:SNP000455059"
> FT   variation       6708..6708
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0570938"
> FT                   /note="heterozygosity_std_error=0.0344965"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212869"
> FT   variation       7310..7310
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0665879"
> FT                   /note="heterozygosity_std_error=0.0364269"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212870"
> FT                   /db_xref="HGBASE:SNP000890321"
> FT   variation       7328..7328
> FT                   /replace="A|C"
> FT                   /note="heterozygosity=0.011428"
> FT                   /note="heterozygosity_std_error=0.0160227"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212871"
> FT                   /db_xref="HGBASE:SNP000455060"
> FT   variation       7341..7341
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0227238"
> FT                   /note="heterozygosity_std_error=0.0223308"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212872"
> FT   variation       7502..7502
> FT                   /replace="G|C"
> FT                   /note="heterozygosity=0.49596"
> FT                   /note="heterozygosity_std_error=0.00949059"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:586459"
> FT                   /db_xref="HGBASE:SNP000137014"
> FT   variation       7518..7518
> FT                   /replace="T|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:646056"
> FT                   /db_xref="HGBASE:SNP000956048"
> FT   variation       7522..7522
> FT                   /replace="G|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:646064"
> FT                   /db_xref="HGBASE:SNP000956049"
> FT   variation       7859..7859
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.492742"
> FT                   /note="heterozygosity_std_error=0.0131291"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:647451"
> FT                   /db_xref="HGBASE:SNP000137313"
> FT   variation       8065..8065
> FT                   /replace="C|T"
> FT                   /note="heterozygosity=0.011428"
> FT                   /note="heterozygosity_std_error=0.0160227"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212873"
> FT   variation       8118..8120
> FT                   /replace="-|GAG"
> FT                   /note="heterozygosity=0.0227238"
> FT                   /note="heterozygosity_std_error=0.0223308"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212874"
> FT                   /db_xref="HGBASE:SNP000494495"
> FT   variation       8218..8218
> FT                   /replace="A|T"
> FT                   /note="heterozygosity=0.0116949"
> FT                   /note="heterozygosity_std_error=0.0163939"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212875"
> FT   variation       8314..8314
> FT                   /replace="G|C"
> FT                   /note="heterozygosity=0.0116949"
> FT                   /note="heterozygosity_std_error=0.0163939"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212876"
> FT   variation       8330..8330
> FT                   /replace="A|T|C"
> FT                   /note="heterozygosity=0.0568555"
> FT                   /note="heterozygosity_std_error=0.0346319"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212877"
> FT   variation       8548..8548
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212878"
> FT                   /db_xref="HGBASE:SNP000470651"
> FT   variation       8770..8770
> FT                   /replace="G|A|C"
> FT                   /note="heterozygosity=0.492188"
> FT                   /note="heterozygosity_std_error=0.0132213"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:602652"
> FT                   /db_xref="HGBASE:SNP000214986"
> FT   variation       9038..9038
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.499893"
> FT                   /note="heterozygosity_std_error=0.000550762"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:603965"
> FT   variation       9609..9609
> FT                   /replace="-|G"
> FT                   /note="heterozygosity=0.5"
> FT                   /note="heterozygosity_std_error=0.000141421"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212879"
> FT                   /db_xref="HGBASE:SNP000494496"
> FT   variation       9807..9807
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.0814845"
> FT                   /note="heterozygosity_std_error=0.0538736"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212880"
> FT                   /db_xref="HGBASE:SNP000220350"
> FT   variation       10191..10191
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0219751"
> FT                   /note="heterozygosity_std_error=0.0216077"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212881"
> FT   variation       10482..10482
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0110789"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212882"
> FT   variation       10488..10488
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212883"
> FT   variation       10513..10513
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0331398"
> FT                   /note="heterozygosity_std_error=0.02637"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212884"
> FT   variation       10921..10921
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.499419"
> FT                   /note="heterozygosity_std_error=0.00363462"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:649392"
> FT                   /db_xref="HGBASE:SNP000575116"
> FT   variation       11025..11025
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212885"
> FT   variation       11112..11112
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0115604"
> FT                   /note="heterozygosity_std_error=0.0162065"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212886"
> FT                   /db_xref="HGBASE:SNP000220351"
> FT   variation       11221..11221
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0219751"
> FT                   /note="heterozygosity_std_error=0.0216077"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212887"
> FT   variation       11464..11464
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0224697"
> FT                   /note="heterozygosity_std_error=0.022085"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212888"
> FT   variation       11534..11534
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0110789"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212889"
> FT                   /db_xref="HGBASE:SNP000694930"
> FT   variation       11540..11540
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212890"
> FT                   /db_xref="HGBASE:SNP000694931"
> FT   variation       11635..11635
> FT                   /replace="C|A"
> FT                   /note="heterozygosity=0.485797"
> FT                   /note="heterozygosity_std_error=0.0176102"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212891"
> FT                   /db_xref="HGBASE:SNP000956443"
> FT   variation       11809..11809
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.458272"
> FT                   /note="heterozygosity_std_error=0.0291535"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2510467"
> FT                   /db_xref="HGBASE:SNP000140079"
> FT   variation       11988..11988
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.24013"
> FT                   /note="heterozygosity_std_error=0.0538745"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212892"
> FT   variation       12112..12112
> FT                   /replace="G|A"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3206821"
> FT                   /db_xref="HGBASE:SNP000220346"
> FT   variation       12243..12243
> FT                   /replace="A|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:7177"
> FT                   /db_xref="HGBASE:SNP000481163"
> FT   variation       12321..12321
> FT                   /replace="C|A"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1803356"
> FT                   /db_xref="HGBASE:SNP000011291"
> FT                   /db_xref="HGBASE:SNP000314898"
> FT   variation       12865..12865
> FT                   /replace="C|G"
> FT                   /note="heterozygosity=0.499937"
> FT                   /note="heterozygosity_std_error=0.00119942"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:678653"
> FT                   /db_xref="HGBASE:SNP000586739"
> FT   variation       12884..12884
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212893"
> FT   variation       complement(12900..12900)
> FT                   /replace="G|A"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2510607"
> FT                   /db_xref="HGBASE:SNP000350269"
> FT   variation       13000..13000
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212894"
> FT   variation       13012..13012
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0222195"
> FT                   /note="heterozygosity_std_error=0.0218437"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212895"
> FT                   /db_xref="HGBASE:SNP000643371"
> FT   variation       13090..13090
> FT                   /replace="T|G"
> FT                   /note="heterozygosity=0.0224697"
> FT                   /note="heterozygosity_std_error=0.022085"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212896"
> FT                   /db_xref="HGBASE:SNP000494497"
> FT   variation       13294..13294
> FT                   /replace="G|T"
> FT                   /note="heterozygosity=0.0118332"
> FT                   /note="heterozygosity_std_error=0.016586"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212897"
> FT   variation       13465..13465
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0118332"
> FT                   /note="heterozygosity_std_error=0.016586"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212898"
> FT   variation       13779..13779
> FT                   /replace="A|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:2062445"
> FT                   /db_xref="TSC-CSHL:TSC1095355"
> FT                   /db_xref="HGBASE:SNP000172380"
> FT   variation       14048..14048
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212899"
> FT                   /db_xref="HGBASE:SNP000254637"
> FT   variation       14095..14095
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212900"
> FT                   /db_xref="HGBASE:SNP000334741"
> FT   variation       14358..14358
> FT                   /replace="C|A"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212901"
> FT                   /db_xref="HGBASE:SNP000587591"
> FT   variation       14486..14486
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0224697"
> FT                   /note="heterozygosity_std_error=0.022085"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212902"
> FT   variation       14490..14490
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212903"
> FT   variation       14504..14504
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0224697"
> FT                   /note="heterozygosity_std_error=0.022085"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212904"
> FT   variation       14636..14636
> FT                   /replace="T|A"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1051062"
> FT                   /db_xref="HGBASE:SNP000011058"
> FT   variation       14714..14714
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212905"
> FT                   /db_xref="HGBASE:SNP000334742"
> FT   variation       14796..14796
> FT                   /replace="A|T"
> FT                   /note="heterozygosity=0.0111728"
> FT                   /note="heterozygosity_std_error=0.0156679"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212906"
> FT   variation       14904..14904
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.044421"
> FT                   /note="heterozygosity_std_error=0.0303298"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212907"
> FT                   /db_xref="HGBASE:SNP000989971"
> FT   variation       14939..14939
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212908"
> FT                   /db_xref="HGBASE:SNP000220352"
> FT   variation       14966..14966
> FT                   /replace="G|T"
> FT                   /note="heterozygosity=0.0112994"
> FT                   /note="heterozygosity_std_error=0.0158436"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212909"
> FT   variation       15158..15158
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.059117"
> FT                   /note="heterozygosity_std_error=0.035657"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:7178"
> FT                   /db_xref="HGBASE:SNP000481164"
> FT   variation       15273..15273
> FT                   /replace="C|A"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1051357"
> FT                   /db_xref="HGBASE:SNP000954786"
> FT   variation       15338..15338
> FT                   /replace="T|G"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1803191"
> FT                   /db_xref="HGBASE:SNP000011057"
> FT                   /db_xref="HGBASE:SNP000172103"
> FT   variation       15346..15346
> FT                   /replace="T|C"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:1803190"
> FT                   /db_xref="HGBASE:SNP000011056"
> FT   variation       15463..15463
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0222195"
> FT                   /note="heterozygosity_std_error=0.0218437"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212910"
> FT   variation       15556..15556
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0121216"
> FT                   /note="heterozygosity_std_error=0.0169853"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212911"
> FT   variation       15606..15606
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0121216"
> FT                   /note="heterozygosity_std_error=0.0169853"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212912"
> FT                   /db_xref="HGBASE:SNP000643372"
> FT   variation       15677..15677
> FT                   /replace="C|G"
> FT                   /note="heterozygosity=0.0359168"
> FT                   /note="heterozygosity_std_error=0.0285151"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212913"
> FT                   /db_xref="HGBASE:SNP000643373"
> FT   variation       15778..15782
> FT                   /replace="-|GTGAC"
> FT                   /note="heterozygosity=0.0354908"
> FT                   /note="heterozygosity_std_error=0.0281872"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212914"
> FT   variation       15880..15880
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0121216"
> FT                   /note="heterozygosity_std_error=0.0169853"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212915"
> FT                   /db_xref="HGBASE:SNP000470652"
> FT   variation       15975..15975
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0121216"
> FT                   /note="heterozygosity_std_error=0.0169853"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212916"
> FT   variation       16031..16031
> FT                   /replace="T|C"
> FT                   /note="heterozygosity=0.0115604"
> FT                   /note="heterozygosity_std_error=0.0162065"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212917"
> FT   variation       16053..16053
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0459508"
> FT                   /note="heterozygosity_std_error=0.0313345"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212918"
> FT   variation       16062..16062
> FT                   /replace="A|T"
> FT                   /note="heterozygosity=0.0118332"
> FT                   /note="heterozygosity_std_error=0.016586"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212919"
> FT                   /db_xref="HGBASE:SNP000538125"
> FT   variation       16114..16114
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.183844"
> FT                   /note="heterozygosity_std_error=0.0529259"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212920"
> FT                   /db_xref="HGBASE:SNP000517568"
> FT   variation       16421..16421
> FT                   /replace="A|G"
> FT                   /note="heterozygosity=0.0124219"
> FT                   /note="heterozygosity_std_error=0.0174027"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212921"
> FT                   /db_xref="HGBASE:SNP000538126"
> FT   variation       16511..16511
> FT                   /replace="G|A"
> FT                   /note="heterozygosity=0.161513"
> FT                   /note="heterozygosity_std_error=0.052613"
> FT                   /evidence="not_experimental"
> FT                   /db_xref="dbSNP:3212922"
> XX
> SQ   Sequence 17370 BP; 3365 A; 4860 C; 5302 G; 3843 T; 0 other;
>      gcctagtaac agcgccgcgc ccccattggc tcatgctaat tccagtttcc 
> tctgtcttgc        60
>      gcctgggatg ggggggtgaa gctccctcct ggacccagag ccggttgtgc 
> cggagtgggc       120
>      gagcctcttt atgccctgct gcccctagcc gacttcggcc cgcttcgcgc 
> ctcgggctgg       180
>      gccagggcgc acgcggggct cggggcccct cgccccacgg gatgggagag 
> gccgggtgat       240
>      agctccgggc cccataaatc atccaggcgg ccgccgggtc gggattttat 
> gaatgaaaaa       300
>      gcagctgggc cgcccttgtg cgcgggctga tgctctgagg cttggctatg 
> cgggggccaa       360
>      cgcgattgtg ggtgctcggg gagtgggggg gggcacgacc gtaggtgctc 
> cctgctgggg       420
>      caacccatcg ctccccatgc ggaatccggg ggtaattacc ccccaggacc 
> cggaatatta       480
>      gtaatcctaa ttcccggcgg gggagggggc gcgggaggaa ttcaccctga 
> aaggtggggg       540
>      tggggggggt cgcatcttgc tgtgagcacc ctggcgaagg ggagagggct 
> ttttctatca       600
>      gttttctttg agcttttact gttaagaggg tacggtggtt tgatgacact 
> gaactatatt       660
>      caaaaggaag taaatgaaca gttttcttaa tttggggcag gtactgtaaa 
> aataaaaaca       720
>      aaagttaaga cagtaaaatg tccttttatt ttttaatgca ccaaagagac 
> agaacctgta       780
>      attttaaaaa ctgtgtattt taatttacat ctgcttaagt ttgcgataat 
> attggggacc       840
>      ctctcatgta accacgaaca cctatcgatt ttgctaaaaa tcagatcagt 
> acactcgttt       900
>      gtttaattga taattgttct gaattatgcc ggctcctgcc agccccctca 
> cgctcacgaa       960
>      ttcagtccca gggcaaattc taaaggtgaa gggacgtcta cacccccaac 
> aaaaccaatt      1020
>      aggaaccttc ggtggtcttg tcccaggcag aggggactaa tatttccagc 
> aatttaattt      1080
>      cttttttaat taaaaaaaat gagtcagaat ggagatcact gtttctcagc 
> tttccattca      1140
>      gaggtgtgtt tctcccggtt aaattgccgg cacgggaagg gagggggtgc 
> agttggggac      1200
>      ccccgcaagg accgactggt caaggtagga aggcagcccg aagagtctcc 
> aggctagaag      1260
>      gacaagatga aggaaatgct ggccaccatc ttgggctgct gctggaattt 
> tcgggcattt      1320
>      attttatttt attttttgag cgagcgcatg ctaagctgaa atccctttaa 
> cttttagggt      1380
>      tacccccttg ggcatttgca acgacgcccc tgtgcgccgg aatgaaactt 
> gcacaggggt      1440
>      tgtgtgcccg gtcctccccg tccttgcatg ctaaattagt tcttgcaatt 
> tacacgtgtt      1500
>      aatgaaaatg aaagaagatg cagtcgctga gattctttgg ccgtctgtcc 
> gcccgtgggt      1560
>      gccctcgtgg cgttcttgga aatgcgccca ttctgccggc ttggatatgg 
> ggtgtcgccg      1620
>      cgccccagtc accccttctc gtggtctccc caggctgcgt gtggcctgcc 
> ggccttccta      1680
>      gttgtcccct actgcagagc cacctccacc tcacccccta aatcccgggg 
> gacccactcg      1740
>      aggcggacgg ggccccctgc acccctcttc cctggcggtg agaaaggctg 
> cagcggggcg      1800
>      atttgcattt ctatgaaaac cggactacag gggcaactcc gccgcagggc 
> aggcgcggcg      1860
>      cctcagggat ggcttttggg ctctgcccct cgctgctccc ggcgtttggc 
> gcccgcgccc      1920
>      cctccccctg cgcccgcccc cgcccccctc ccgctcccat tctctgccgg 
> gctttgatct      1980
>      ttgcttaaca acagtaacgt cacacggact acaggggagt tttgttgaag 
> ttgcaaagtc      2040
>      ctggagcctc cagagggctg tcggcgcagt agcagcgagc agcagagtcc 
> gcacgctccg      2100
>      gcgaggggca gaagagcgcg agggagcgcg gggcagcaga agcgagagcc 
> gagcgcggac      2160
>      ccagccagga cccacagccc tccccagctg cccaggaaga gccccagcca 
> tggaacacca      2220
>      gctcctgtgc tgcgaagtgg aaaccatccg ccgcgcgtac cccgatgcca 
> acctcctcaa      2280
>      cgaccgggtg ctgcgggcca tgctgaaggc ggaggagacc tgcgcgccct 
> cggtgtccta      2340
>      cttcaaatgt gtgcagaagg aggtcctgcc gtccatgcgg aagatcgtcg 
> ccacctggat      2400
>      gctggaggtg cggggcttcg ggcggctctc ttaagacttc cctgcaactt 
> gttgcccaga      2460
>      cccacgtttc tttgctactc acccccctcc cttctctccc gctagaactt 
> tgaagtttgc      2520
>      cgtggtgttt ctagggatcc gtattttcaa aataaaaatt gcgggtattt 
> tctgaaggag      2580
>      gaaggggtgg gggtgggggt gctaaaagta gggtttcgtg ggagggaaga 
> aggcggtccg      2640
>      ggaggggtgc cttcggagaa ggccagtgcc aggggcaccc caatgggccc 
> gagggtgcgg      2700
>      gctggcaggc tgggtgcgct ttgtgtccac cgcctgcgcc ccagcccggc 
> tgcgcctcag      2760
>      cggccgggag ccgccagctc cggggggagg gggcatagat ttgattttta 
> aattaatatc      2820
>      catggacacg tatgcaaggg ccgctcgtgc cagtattatg cgccatcttt 
> gctcgtttat      2880
>      tgcaaagcaa aagtgtttat taataattgg gggcagggtg ggggcgggga 
> gcggccgccg      2940
>      ggcgctgggg ccgcagctaa gggccgcgcg gctgccggga gcccgcggga 
> ggggcgcagg      3000
>      gacgcggcat gggtagtttt ggggggaccc cgctagggaa gggggggcct 
> ttgttcaagc      3060
>      agcgagtccc ggggcgcccc gaacgggcag cctgggccgg agagcacggc 
> gagctgcaag      3120
>      gtcgcgtggc ccccaagacg ccagggcttg atccccgtct gcagggatat 
> cggcttggag      3180
>      gaccttctcc gagcgagccg ggggcctggg agcacatttt cagaccttcg 
> gtgggcgcct      3240
>      gaggggcccg caagtatttt aaaataattt ttgaaagtgc ggcgtggtgc 
> ccttgcgaga      3300
>      gggaaacgcc gcccgcgccc agggggaagg gggggccccg gagtttgaat 
> tcctggggct      3360
>      ccccccggag cctgtaacga actcccaacc cccggcctgg gtaaagggtc 
> gcccgagggt      3420
>      cattttcagg gtttttttat gcacttagtt atttttttaa tatttttaaa 
> tattttttga      3480
>      aaagatgacg tctggggaaa tgcggcgcgg cggcctggga cgccaccttt 
> gtgtctcgca      3540
>      ggcgcggcgc ccaaccccgc ggcccgttcc gcggccccgc accccagttg 
> gtgtcgaccc      3600
>      ccagtcagag ggaccacgga gctccagggc gggccagggt cccgggggcc 
> ggcagcccgc      3660
>      gccgccgcgc acgccgccca gctgtgcccg ctcccgcccc caccgtgcca 
> gcctcgcggg      3720
>      gactttccct ttcagtttcg gggagggtgg gtactgggga cgcgcggggg 
> agggggcgca      3780
>      tcacgggaag ctcctgccgc ccccagcccc gacccctcgg cgccctccag 
> acctggcggc      3840
>      cctgccaagc gcgatggggg gtgcgggggc gtgcgggggg gcggcgcgac 
> ctggcggcgg      3900
>      cggtcacggg ccccgtgcct ccgtaggtct gcgaggaaca gaagtgcgag 
> gaggaggtct      3960
>      tcccgctggc catgaactac ctggaccgct tcctgtcgct ggagcccgtg 
> aaaaagagcc      4020
>      gcctgcagct gctgggggcc acttgcatgt tcgtggcctc taagatgaag 
> gagaccatcc      4080
>      ccctgacggc cgagaagctg tgcatctaca ccgacaactc catccggccc 
> gaggagctgc      4140
>      tggtaaccac tggaccccgc cgccccccgc cccccgcgag ccgcacgcag 
> gaccacgggg      4200
>      ccggggaagg tgcaggcggt ggcggccggc ccgcctctga catatctgct 
> cctccgaggg      4260
>      agggcggccc cgccgccggg cgtccctgtc cggggagcgg gcgggatcct 
> agccgccctc      4320
>      gtcccgccgc cctgtgtgcg cttgcctgcg actcccaccg cgttcgcgcc 
> ccgcggtgtg      4380
>      gccgaaaagt gggcggcgcg cgccctccag cggctgcacg aggagcgccg 
> cgctcggcgc      4440
>      tgagcctcca gttccaggtg gtgggaggtc tttttgtttc cacttgcaga 
> gtcttttcac      4500
>      gcggcgggcg ccttttctgt tttgatctgg gattgcgtgt tgccccagct 
> cccttgagtc      4560
>      cccagcattc gccagccctc ccctccaaca tccaggaccg cacgagacgc 
> aggggccagt      4620
>      gctctgagcc ggaggtgcgg cgtggcccgg cccccgtgct gccggcttcc 
> ccgcgccccc      4680
>      gggctggccc gcacctcccc tgatggccgc tcaccctgtg ttcgcagcaa 
> atggagctgc      4740
>      tcctggtgaa caagctcaag tggaacctgg ccgcaatgac cccgcacgat 
> ttcattgaac      4800
>      acttcctctc caaaatgcca gaggcggagg agaacaaaca gatcatccgc 
> aaacacgcgc      4860
>      agaccttcgt tgccctctgt gccacaggta gggcaggccc ggcagccccc 
> ggcctcccct      4920
>      tgagagccgg ctccttaggt gaccctggcc ggcttcttgc tctccacctg 
> ggtgctgtct      4980
>      gggaagatgt ccccagaccc cctcctgcgc tggagagcgc tcttccagct 
> ctggtgagca      5040
>      gaggccctgg attgtttgtc gcgctggatg gagggagatt tgctccctca 
> cggccaccat      5100
>      gcagtacctt gggcattggt gtggacggct cagcctgcct gtgtcccgtt 
> actctggcct      5160
>      cgtccttcag gccaggcagc ctgtggccac tccatgctga aaggggttta 
> ccttggccac      5220
>      agggccgcct cctttctcca cccacctcca gcccttcttg tgtccttaag 
> gagcctgagc      5280
>      tgcagaggcc ccctcctggc ctctcccagg ctgggccacc tgccagaggc 
> gcctccaggg      5340
>      gcggggagag ctgtcggcct gcctgcacca cgtgctctgg gcagccgagt 
> gcaggggtgt      5400
>      ccagcagagg agctcggctg cctgaggccc tgccaggggt gccggcagcc 
> agccgggctc      5460
>      agctgagccc tgagggggcg cttcagagca ctctcagctt gggccgccac 
> cgtgggcagc      5520
>      agaagcaccc agtcctcact tcccctggca tggccccaga ggcccctccc 
> tgacatggcc      5580
>      ttggccccag aacccagtgg ggacagactc gcacatacac agggtgccgc 
> ctcctgctgt      5640
>      ccccagccct gcctctgacc cccctgtgac cgcctccttc cctggcccag 
> gaggcctggt      5700
>      taccttcatg ggggagcatg gccccatccc acccagctct gctgtggccc 
> acctttggtc      5760
>      aagcctcagt tgtcacatct gtttgggggc tcactctggg tgacctaggc 
> cacaaggccc      5820
>      acggggcatc aaagaggcag tagcatcttc tcccctcccc agagggcaga 
> gccccccaag      5880
>      cctacttcag agctcccttc tgacaccggt agcccgcagc cggtattcca 
> gaatgggttc      5940
>      tggtttaggc gtgaggcctc ccccacctcc tccacctgct tggggcatga 
> acccctcccc      6000
>      cacgtttcca agcgagtccc caaggtgggc agatgaagat gccaaggatg 
> tcgaccagtc      6060
>      tggatgggtc tggggtgggg gggcatgcgg cagacaggga ggcattctct 
> ggctggtgct      6120
>      cctcagagga gagaggcctc cggagactcc agacagcctt ttatggagct 
> gaaagtggct      6180
>      tcagagaaat gcaaagtttc ctggagagaa cgtggggcgt ggttcttgca 
> cagcctccct      6240
>      acagggtggc tccagcagtg gagctcccct cccaggaccc ctgggtgcta 
> gtgggaggca      6300
>      gtgggcaggt gcagattctc gtccttccca ctactgcaca ccctttgtct 
> gcgaaggcgc      6360
>      ccccagcggt gggtgaagga ggagggacac ttggggaccc agctgtgcac 
> gtgctctcag      6420
>      tgactgtgga gtccactcca gggtgggtcc cgagggaggg gcaggagacc 
> aggggaccca      6480
>      cccctgcaaa gtgctccggg tcctgacccg tggccacccc atggaacgta 
> actgagcagc      6540
>      cagtgccttg ttcctgctgg acatctgtgg agacaagagt gacttacggc 
> tgcttaaagt      6600
>      cagaaacagg ttgaaggagg tggaggcgtg ggaaagagtc taggaaggtg 
> tttttgccct      6660
>      ccacgtggca aaggttacat ttaaaggtga tgctgggtgt tctccctgca 
> ctaggcattc      6720
>      ctggccccag gtccccagca ggtgtgcaca tgctgcatac actcacgcat 
> gggggtttca      6780
>      gggcaggtgc gcccttggct ccgtgggagg ccaggtgagg aacgtccagt 
> gccaaggagc      6840
>      ttccgggaca gctgtcactt ccctttacaa ccaggcagcg gatagggtca 
> aatcctggag      6900
>      ctttggtgtc taattctggg tggctcctaa tctaagcaca gacagcacca 
> cacactgggg      6960
>      tgggggcacg agcttctgaa acaacgtggc cccagtgact ccacgctgtg 
> tgtgcccctg      7020
>      gagacggggg ggtgcacaag gtgcggagcc agctagaacc tgtcgctccc 
> tgcagaagcg      7080
>      gtttctgtgt gcggttctga tttgcctcaa tgagaaggtt ttcattcatg 
> gctcccggct      7140
>      ctcagactgg gtggaactgc tcccatttaa aggggaaaag aggtggctcg 
> gctcgttaag      7200
>      gatttctttt tctaagttgt tacggcgccc agcagccggc tttgtctccc 
> cttcagggtg      7260
>      gctgcctttc ttcccggccc ctcgccggcg gccctctctt taacaaggcc 
> gaagttgttt      7320
>      attctctcgg gatgaagtct cggatgggcc gccacacccc tggcggcccg 
> tgggggcccc      7380
>      tctccctttg tgcctgggtc ggctcccatt cagctccccc gacccccctt 
> gttcccgggc      7440
>      gctcagtggc gcgagatgag gcgatggggc cgacaaagat gccacactca 
> tccctgccga      7500
>      cgtccggctc ccagcccagg gcccctggtt cctgtgcaga attcctcgtg 
> ggtgtgacaa      7560
>      aaggctgccc ccaggctccg ctggggtggg ggccaggcca agaggcacat 
> cccacactgg      7620
>      cccacctgtc cacggtaggc gcatgactgc cctgaggagg ggaggccggc 
> attccccgcc      7680
>      acaaaccagg acgtaattgg tggcagggct ctctgtggaa agagccagtc 
> tgctgtttgt      7740
>      ctaggaggtc agtcacagag gccccgagac gcccactact gcagcctggc 
> aggcggatga      7800
>      gcccagtatc tggcagtgac cagagggagt tttgtgcaga ccacaaaggc 
> tgatgggccg      7860
>      ccctagattg gtgtccctct tggaagtggg cccagatgtg cgggacagtc 
> cccaggaagc      7920
>      cccaggtgag ggcactggtg ccctcttggg aaagctgctc cctcctgggg 
> cccggctccc      7980
>      ggcccagtcc tccaggggtg tcccatggtg actggtgcta ggaaccccac 
> acctcttccc      8040
>      ttacttggga agtcactgga attgttgggc tacatcagac ggcccagaaa 
> agtgtttttg      8100
>      tcatcggcca gaaataggag agttgtgagt agagggcccg ggtggagttg 
> gggtgtactt      8160
>      ggtctgtgct ctgaaggtca ctgtgacagt catggtccca tggtaagggg 
> catgggttgc      8220
>      tggaagagct cttccttccc gagtgagcca agccgggctc tcctggcgcc 
> agggcctgag      8280
>      ccgcagccac accacagccg ccctgaaggc tgccggccag ggcttacccc 
> tcaagggaca      8340
>      cggaatggct tcatcagtac cctgcagccc cgtggcctgg cccgggtgga 
> ggcctaggct      8400
>      tcagccatgc gatgtccctt cagaatatga cttgtctgca atccctgctg 
> ctggggggtg      8460
>      gcaggtactt ggggtgaggg ttagggtcat agaagcgaca tctctacgtc 
> ctcatatttg      8520
>      cgtcatctaa ttttgttttt gtgaatacgt gataacattc acaaggctca 
> agatgctaaa      8580
>      aggatgagaa ggcagtgatg tccccatcac ctgtcctgtg tcttcccgtg 
> gctttctctt      8640
>      tccttggtta tgtttgagtc aacagtgggg ctgacgttcc aggagggtcc 
> gtgggccagg      8700
>      ctcttgctct ccgagtgccc agggatggct ggaggctgag gagggcctgg 
> atgtggagcc      8760
>      tcagataccg agtgcttccc ttcaggccgg gccgcttgct cagagccagc 
> acacagggat      8820
>      gcccggatca cgggggccct gagagggtcc cctgctcaca gcctccttcc 
> ctctctcctt      8880
>      ctgcctcaga tgtgaagttc atttccaatc cgccctccat ggtggcagcg 
> gggagcgtgg      8940
>      tggccgcagt gcaaggcctg aacctgagga gccccaacaa cttcctgtcc 
> tactaccgcc      9000
>      tcacacgctt cctctccaga gtgatcaagt gtgacccggt aagtgagggt 
> gatgtcccag      9060
>      gcagccttgc cggggcttac agggggagac acctagtgcc acggaaatgc 
> cgaggctggt      9120
>      gccaaggccc ccaagggtga caaggttggg gctggggctg ggcccctcgg 
> accccaggcc      9180
>      acagactgac agggcaccgg cttcttccac tgctcctaga acttactgac 
> tggctgggag      9240
>      gtcctcacag ccttctcacg tcccctgggg cttccaggag ccgtagagtt 
> tctgggcgaa      9300
>      gcgtccggga cggaggcccc aggcggcccc agccaatggt ctgtgtggtg 
> atggtgtgtg      9360
>      gggttaggcc caggcgagct ttgtttgggc cacaatgtgc gtggccaata 
> aatagatgct      9420
>      tgaaaagggc tcctgtgagg tccgagacac cggacaacgg gcggatagag 
> acagccttgt      9480
>      tgtttacggc ctctttgaga ggctgctgct gttaaaccct gggatgactg 
> tgtctttctt      9540
>      cttaaaaatg ccattgtttt attcccgagt cttttcttaa agaaagaatt 
> aaaatgacaa      9600
>      tcaaaagggt ttgtggcatt taccaaatta gaccagagag gtggccgggt 
> cagccgccgg      9660
>      ccccgcggtg tgtgagggag tgaccgcctg accccagctt ggggctgggt 
> gggcctgcaa      9720
>      gacccgtttt ggctctggcc tgggccgcct cttggtggtc tgccctcgag 
> cctcccgggg      9780
>      actccgcacg ggtctcagca gatgctatct agggtccacc tgcctgtccc 
> ctgcctagtg      9840
>      gtgcctctgt cccggggaca ctgggagtag cggctgccca gcccatgtgt 
> gtctcggaag      9900
>      aggaagaagc ttttttgccg tgggacaccg aagttggcag gggcctccct 
> tctgtgttct      9960
>      cggccatggc ctcccttgca ccctgccccg tgttatcctt tgggggtggt 
> gaggtgtcct     10020
>      cacccgctgt agggtggagg ccagcagccc gcagctctct caggaaaatg 
> gctcagaaac     10080
>      accatcgagg cctccagaag cccagcaaag agaaagcccc tccatcaaaa 
> tgaaactcgc     10140
>      gtctgcactt ttcatttcga actccacgcc ctgagtgaaa accgcttccc 
> cgccaggggt     10200
>      gactgccctg ggatgttgct gtcttcgggc agttgtggga agttgggcgc 
> tggcccttat     10260
>      ttgagtagag accatcttaa ctagattgga ggcacacgtc tcacagctga 
> cagacacacg     10320
>      gggtgaagtt acccgaggcg gagtccactc tgcctgatca gctagtgacc 
> aacgtagctg     10380
>      agcccagact cagaaaaacc gtccacagca gaggcccctg cattttctag 
> ggcgtgttct     10440
>      agaattttct ttggtgggtg gaatgtccat ctgtgcaaat cgggtgcgca 
> gtgccacaca     10500
>      ccagtgactt ttcgcggagg agcgtgctgc ctttttggag cttctggctg 
> tgggagaaca     10560
>      gctttgtcca ccggggtagc cttgcaggca gctgtggggc cagaggaatg 
> aaggaaggtc     10620
>      ctggagtcta gctgcatgtg tgaccctgga gtgggtcatg ggcgagggac 
> gggccgcagg     10680
>      tgaagaatcc ctggatggag ctgccaggcc cctggggctg agaattgaag 
> ctggctggtg     10740
>      ttttaggttg aacgtcagga gtcttgtatc tcaccccagg cctctggcct 
> cagtttcccc     10800
>      atctgtacag tgggactgtt tgtgcagcca gcccggccag cttcatttgc 
> catgatgaga     10860
>      atttatctga ggggcgggag aggaaagccc tccctataaa ggtacaggcg 
> ctaaaatgtc     10920
>      gtgacctcag tggtccacct aaaagtcgtt ctggcctggg tcatcgcctg 
> tcgtgctatg     10980
>      cctttgtcca gccccttctg gttgggagtt aagtggcacc tgtgcggcac 
> gtggtggggc     11040
>      tgtggcccag ccctgctcct tgtggaaggt ctgtttcctg ggctgcctag 
> agacttggct     11100
>      tgaagcccta gcgtggcttc ctggcagttg ggacacacac agccccaaca 
> catggagccg     11160
>      gttctccatc cagaagcccc cgggcagtaa gcagccactt caggctgcgt 
> gggacttgcc     11220
>      cgtggtggag cctaggagag gcccctggct gggcgtggcg ttccagattt 
> cacggctgct     11280
>      ctttcccact gacagtgtgg tgtggacgct gccaagggag tctggagccc 
> cagagggtgg     11340
>      aggtgcagga cttccaggag cgtccgtcgc actccacccg agggcgagca 
> cctcagtggc     11400
>      cgcagtgggt ggatgcatgc tgtgccaggc tgatggctgg ccccggggca 
> caggcctgag     11460
>      cgggagagga tggaggggag ggatcaatgg tccaggtccc cctggccacc 
> cagcattcat     11520
>      cctcagtcat gcacggccca aggcttcgac agccattgat catggaaggc 
> caggttcacc     11580
>      tcaagggctg ccacatggag aggttaagtc tgaaaaggct gaaaaggcag 
> ggttcaaagg     11640
>      gcctcctgtc cagatcagat ggcactgaat tccccaggga gctggcacgg 
> ccagtgggaa     11700
>      caggcggtga aggcgctgtt ggacatgggg acgggcaggg ggtgtgcagg 
> gtgggcgggc     11760
>      aagcatctgg tgtcttgtgg ctccagagac caggtgggag gtggaggcat 
> ttggtcctga     11820
>      gtgtcctgac aggtgatggc agctcccaca tctcgctcag gttcagagga 
> ggcagcatgg     11880
>      gccgagggac agtttttggc ttagtcttgc tcttataaag gcttccgggt 
> catggcacct     11940
>      gggaaggggc cctcgctgca ggccccttct aaggaccccc tcttcccacc 
> tctccccacc     12000
>      ctctctctct caggactgcc tccgggcctg ccaggagcag atcgaagccc 
> tgctggagtc     12060
>      aagcctgcgc caggcccagc agaacatgga ccccaaggcc gccgaggagg 
> aggaagagga     12120
>      ggaggaggag gtggacctgg cttgcacacc caccgacgtg cgggacgtgg 
> acatctgagg     12180
>      gcgccaggca ggcgggcgcc accgccaccc gcagcgaggg cggagccggc 
> cccaggtgct     12240
>      cccctgacag tccctcctct ccggagcatt ttgataccag aagggaaagc 
> ttcattctcc     12300
>      ttgttgttgg ttgttttttc ctttgctctt tcccccttcc atctctgact 
> taagcaaaag     12360
>      aaaaagatta cccaaaaact gtctttaaaa gagagagaga gaaaaaaaaa 
> atagtatttg     12420
>      cataaccctg agcggtgggg gaggagggtt gtgctacaga tgatagagga 
> ttttataccc     12480
>      caataatcaa ctcgttttta tattaatgta cttgtttctc tgttgtaaga 
> ataggcatta     12540
>      acacaaagga ggcgtctcgg gagaggatta ggttccatcc tttacgtgtt 
> taaaaaaaag     12600
>      cataaaaaca ttttaaaaac atagaaaaat tcagcaaacc atttttaaag 
> tagaagaggg     12660
>      ttttaggtag aaaaacatat tcttgtgctt ttcctgataa agcacagctg 
> tagtggggtt     12720
>      ctaggcatct ctgtactttg cttgctcata tgcatgtagt cactttataa 
> gtcattgtat     12780
>      gttattatat tccgtaggta gatgtgtaac ctcttcacct tattcatggc 
> tgaagtcacc     12840
>      tcttggttac agtagcgtag cgtgcccgtg tgcatgtcct ttgcgcctgt 
> gaccaccacc     12900
>      ccaacaaacc atccagtgac aaaccatcca gtggaggttt gtcgggcacc 
> agccagcgta     12960
>      gcagggtcgg gaaaggccac ctgtcccact cctacgatac gctactataa 
> agagaagacg     13020
>      aaatagtgac ataatatatt ctatttttat actcttccta tttttgtagt 
> gacctgttta     13080
>      tgagatgctg gttttctacc caacggccct gcagccagct cacgtccagg 
> ttcaacccac     13140
>      agctacttgg tttgtgttct tcttcatatt ctaaaaccat tccatttcca 
> agcactttca     13200
>      gtccaatagg tgtaggaaat agcgctgttt ttgttgtgtg tgcagggagg 
> gcagttttct     13260
>      aatggaatgg tttgggaata tccatgtact tgtttgcaag caggactttg 
> aggcaagtgt     13320
>      gggccactgt ggtggcagtg gaggtggggt gtttgggagg ctgcgtgcca 
> gtcaagaaga     13380
>      aaaaggtttg cattctcaca ttgccaggat gataagttcc tttccttttc 
> tttaaagaag     13440
>      ttgaagttta ggaatccttt ggtgccaact ggtgtttgaa agtagggacc 
> tcagaggttt     13500
>      acctagagaa caggtggttt ttaagggtta tcttagatgt ttcacaccgg 
> aaggttttta     13560
>      aacactaaaa tatataattt atagttaagg ctaaaaagta tatttattgc 
> agaggatgtt     13620
>      cataaggcca gtatgattta taaatgcaat ctccccttga tttaaacaca 
> cagatacaca     13680
>      cacacacaca cacacacaca aaccttctgc ctttgatgtt acagatttaa 
> tacagtttat     13740
>      ttttaaagat agatcctttt ataggtgaga aaaaaacaat ctggaagaaa 
> aaaaccacac     13800
>      aaagacattg attcagcctg tttggcgttt cccagagtca tctgattgga 
> caggcatggg     13860
>      tgcaaggaaa attagggtac tcaacctaag ttcggttccg atgaattctt 
> atcccctgcc     13920
>      ccttccttta aaaaacttag tgacaaaata gacaatttgc acatcttggc 
> tatgtaattc     13980
>      ttgtaatttt tatttaggaa gtgttgaagg gaggtggcaa gagtgtggag 
> gctgacgtgt     14040
>      gagggaggac aggcgggagg aggtgtgagg aggaggctcc cgaggggaag 
> gggcggtgcc     14100
>      cacaccgggg acaggccgca gctccatttt cttattgcgc tgctaccgtt 
> gacttccagg     14160
>      cacggtttgg aaatattcac atcgcttctg tgtatctctt tcacattgtt 
> tgctgctatt     14220
>      ggaggatcag ttttttgttt tacaatgtca tatactgcca tgtactagtt 
> ttagttttct     14280
>      cttagaacat tgtattacag atgccttttt tgtagttttt ttttttttta 
> tgtgatcaat     14340
>      tttgacttaa tgtgattact gctctattcc aaaaaggttg ctgtttcaca 
> atacctcatg     14400
>      cttcacttag ccatggtgga cccagcgggc aggttctgcc tgctttggcg 
> ggcagacacg     14460
>      cgggcgcgat cccacacagg ctggcggggg ccggccccga ggccgcgtgc 
> gtgagaaccg     14520
>      cgccggtgtc cccagagacc aggctgtgtc cctcttctct tccctgcgcc 
> tgtgatgctg     14580
>      ggcacttcat ctgatcgggg gcgtagcatc atagtagttt ttacagctgt 
> gttattcttt     14640
>      gcgtgtagct atggaagttg cataattatt attattatta ttataacaag 
> tgtgtcttac     14700
>      gtgccaccac ggcgttgtac ctgtaggact ctcattcggg atgattggaa 
> tagcttctgg     14760
>      aatttgttca agttttgggt atgtttaatc tgttatgtac tagtgttctg 
> tttgttattg     14820
>      ttttgttaat tacaccataa tgctaattta aagagactcc aaatctcaat 
> gaagccagct     14880
>      cacagtgctg tgtgccccgg tcacctagca agctgccgaa ccaaaagaat 
> ttgcaccccg     14940
>      ctgcgggccc acgtggttgg ggccctgccc tggcagggtc atcctgtgct 
> cggaggccat     15000
>      ctcgggcaca ggcccacccc gccccacccc tccagaacac ggctcacgct 
> tacctcaacc     15060
>      atcctggctg cggcgtctgt ctgaaccacg cgggggcctt gagggacgct 
> ttgtctgtcg     15120
>      tgatggggca agggcacaag tcctggatgt tgtgtgtatc gagaggccaa 
> aggctggtgg     15180
>      caagtgcacg gggcacagcg gagtctgtcc tgtgacgcgc aagtctgagg 
> gtctgggcgg     15240
>      cgggcggctg ggtctgtgca tttctggttg caccgcggcg cttcccagca 
> ccaacatgta     15300
>      accggcatgt ttccagcaga agacaaaaag acaaacatga aagtctagaa 
> ataaaactgg     15360
>      taaaacccca gcgtggtgcc tgcctctttg cttcctgggc tggccgtgag 
> ccagggacgc     15420
>      gtgtcctggt gccctagaac cagggcaggg tggcaggctt ggcggatgtg 
> ggaggccgca     15480
>      gcctgtcctg tgcgctgtgg gaagttcagc agcatcctga cctccatccc 
> cgggatgaca     15540
>      gtcacgccac ccgccgtgac aaccaagaat gtctcctgac actgccacat 
> ccccgggggt     15600
>      ggggacagaa tccagccagg agcaggcaca cccctcccaa ctgggaggaa 
> gccctcagca     15660
>      caggtgtgtg aggtgggagg cggtgtcctg tccccgggag gctccagaga 
> ataatttgca     15720
>      ggctgcctgg ctgggtgagc ccacctccaa ccacgcgaga caacagctcc 
> ggcctgggtg     15780
>      acgtgagcgg tgcccattga tggggaacat cttccccctc ttccttgccc 
> caccagtttg     15840
>      tcttcccggg ttatttgcag ataggaaaat aaataaagcc ggcattcgtt 
> aaccctcttc     15900
>      tggcgcaaac tgctgtttgc tctggatgaa tcatggtcct ttggcgacgc 
> caggctccgg     15960
>      gagagcaaag caccgtgtca gggccatgat ccggggtggc ctttcactgg 
> gatcgtgggg     16020
>      acctggaggc cgccttatag gacacccatg acgcccacct ctggatttca 
> ggtgcacgtg     16080
>      actggactta acttcaaacc ccagggtgga ggcaggtagt gggagtgccc 
> tgggaaggtg     16140
>      tcctcggacc ttggtcactg ctcctgaacc catctgtgag gctggtttgt 
> cctcatccca     16200
>      agctaagtgg aagctcaggt cccaagccac cgatgggtgc tacttgtcag 
> ctgcaggttg     16260
>      aatctccgtg gcctttatga agcacctgct gtctaccctt cctgccttgt 
> agagcactcc     16320
>      tcccagggct caacagtggg gccggggtgg tcggtgtgtt ggctccacag 
> gcgcctgccc     16380
>      tgggaggaag gtggggtgtg gagggaaacg cttggcccct gtaggtctcc 
> accagcctct     16440
>      cccctgaggg tgggggctcc gggagccttc ctcgagggag tcctatattg 
> agtgggtggg     16500
>      ggagcctgca aggtgcccct gacaggtcac atcagaaaga gctcaaggga 
> cagtcggagc     16560
>      cagaggtgac actggtggcc actcgggtgg ctcacaaggc ccagctcctc 
> cttgctcctg     16620
>      ggcaaattac tctgaaggca gggaccaggt ctgcaccatt gcggctctcc 
> agttccaggc     16680
>      aatggccagg tcctgtgtca gggctggggt cctagggaag ccatgtcccc 
> acccccggcc     16740
>      tgcagctggg tttacattca tcccccgaga gcacatgggt gtagcaggag 
> gcctgtgcag     16800
>      agagctccga ccatcgcaca gggcaccttt ggttgtttca cggagcaggc 
> aagggagcca     16860
>      tcggatcctg ttaggtttga gcaaggatgt ggggaagaag ctggagagcc 
> actttgccat     16920
>      gcagggagag gagcacatgg gtctagggat ctactttagt gtttggaagg 
> ttttttaaga     16980
>      tgaaagaggg atgtgtaggc tgataggtct ggcagagcca aaaggcagcg 
> acatgtctac     17040
>      tgggagagat ggagctgagc gcggggctca ggcagggtgg cagggcaggg 
> ccggggccct     17100
>      gggtgggtca ggtgggttca cagccaagtg tgtagagagg gcttgggccc 
> agagtgaagc     17160
>      agttgcaagc tctcccacaa cccattctct ctgtctcggc atctgtggca 
> tcccgtgatg     17220
>      ggtgggtctg tacacacccc acccctggct gtgccacaat gggggtgtct 
> gtacacccct     17280
>      cacccctggc tgtgccacga tgggggggtc tgtacacccc ccatccctgg 
> ctgtgccacg     17340
>      atggggggtt ctgtacatcc cccagtgatg                         
>              17370
> //
>   
> 
> 
>  ##################################
>   ccnd1_mus.embl
>   ###################################
>   
> 
> ID   Chromosome 7 135379270 to 135391916  ENSEMBL; DNA; HUM; 12647 BP.
> XX
> AC   Chromosome 7 135379270 to 135391916;
> XX
> SV   NO_SV_NUMBER
> XX
> DE   Reannotated sequence via Ensembl
> XX
> KW   HTG.
> XX
> OS   Mus musculus (House mouse)
> OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; 
> Eutheria; Rodentia;
> OC   Sciurognath; Muridae; Murinae; Mus.
> XX
> CC   This sequence was reannotated via the Ensembl system. 
> Please visit the
> CC   Ensembl web site, http://www.ensembl.org/ for more information.
> XX
> CC   The reference, comment, description and feature table of 
> the original
> CC   entry can be found in the DDBJ/EMBL/GenBank database 
> with the identical
> CC   accession number.
> XX
> CC   The /gene indicates a unique id for a gene, /cds a 
> unique id for a
> CC   translation and a /exon a unique id for an exon. These 
> ids are maintained
> CC   wherever possible between versions. For more information 
> on how to
> CC   interpret the feature table, please visit
> CC   http://www.ensembl.org/Docs/embl.html.
> XX
> CC   All the exons and transcripts in Ensembl are confirmed 
> by similarity to
> CC   either protein or cDNA sequences.
> XX
> CC   In unfinished, rough draft DNA sequence gene structures can cross
> CC   fragments and, in these cases, the order and orientation 
> of the fragments
> CC   is likely to be different from the order in the the International
> CC   Nucleotide Sequence Databases DDBJ/EMBL/GenBank.
> XX
> FH   Key             Location/Qualifiers
> FH
> FT   source          1..12647
> FT                   /classification="musculus, Mus, Murinae, Muridae,
> FT                   Sciurognath, Rodentia, Eutheria, 
> Mammalia, Vertebrata,
> FT                   Chordata, Metazoa, Eukaryota"
> FT                   /organism="House mouse"
> FT   CDS             
> join(complement(10313..10510),complement(8704..8919),
> FT                   complement(8111..8270),complement(4832..4980),
> FT                   complement(3423..3587))
> FT                   /transcript="7.135000001-135793178.382692.389779"
> FT                   
> /translation="MEHQLLCCEVETIRRAYPDTNLLNDRVLRAMLKTEETCAPSVSYF
> FT                   
> KCVQKEIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGA
> FT                   
> TCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEH
> FT                   
> FLSKMPEADENKQTIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLNLGSPNN
> FT                   
> FLSCYRTTHFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNVDPKATEEEGEVEEEA
> FT                   GLACTPTDVRDVDI"
> FT   CDS             
> join(complement(10313..10510),complement(8704..8919),
> FT                   complement(8111..8270),complement(4832..4980),
> FT                   complement(3426..3587))
> FT                   /gene="ENSMUSG00000031071"
> FT                   /cds="ENSMUSP00000033387"
> FT                   /transcript="ENSMUST00000033387"
> FT                   /db_xref="RefSeq:NM_007631"
> FT                   /db_xref="LocusLink:12443"
> FT                   /db_xref="SWISSPROT:P25322"
> FT                   /db_xref="EMBL:M64403"
> FT                   /db_xref="protein_id:AAA37502"
> FT                   /db_xref="EMBL:S78355"
> FT                   /db_xref="protein_id:AAB34495"
> FT                   /db_xref="MarkerSymbol:MGI:88313"
> FT                   
> /translation="MEHQLLCCEVETIRRAYPDTNLLNDRVLRAMLKTEETCAPSVSYF
> FT                   
> KCVQKEIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGA
> FT                   
> TCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEH
> FT                   
> FLSKMPEADENKQTIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAMQGLNLGSPNN
> FT                   
> FLSCYRTTHFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNVDPKATEEEGEVEEEA
> FT                   GLACTPTDVRDVDI"
> FT   CDS             join(12061..12216,15972..16065,33387..33547)
> FT                   /transcript="7.135000001-135793178.391330.412816"
> FT                   
> /translation="KKLVKERTASRRHTRRKPLTFRAHAFRSPSPDIGVPKVRTLRDSD
> FT                   
> STVAPKVMAPLPEGIGQKLLVGLRGSMAPVCPQCTSRSGILRNAIPIIETLTILEQTFG
> FT                   ALESQAPWCFEACSVFLGILIQPAYILFEFLF"
> FT   exon            complement(2001..3587)
> FT                   /exon_id="ENSMUSE00000266344"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(3423..3587)
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(4832..4980)
> FT                   /exon_id="ENSMUSE00000205949"
> FT                   /start_phase=1
> FT                   /end_phase=1
> FT   exon            complement(4832..4980)
> FT                   /exon_id=""
> FT                   /start_phase=1
> FT                   /end_phase=1
> FT   exon            complement(8111..8270)
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(8111..8270)
> FT                   /exon_id="ENSMUSE00000205951"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(8704..8919)
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(8704..8919)
> FT                   /exon_id="ENSMUSE00000205954"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(10313..10510)
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            complement(10313..10647)
> FT                   /exon_id="ENSMUSE00000266376"
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            12061..12216
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            15972..16065
> FT                   /exon_id=""
> FT                   /start_phase=0
> FT                   /end_phase=0
> FT   exon            33387..33547
> FT                   /exon_id=""
> FT                   /start_phase=1
> FT                   /end_phase=1
> XX
> SQ   Sequence 12647 BP; 2763 A; 3160 C; 3111 G; 2614 T; 999 other;
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn        60
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       120
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       180
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       240
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       300
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       360
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       420
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       480
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       540
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       600
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       660
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       720
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       780
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn       840
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnc       900
>      gggacaggcc acggctcctc tcatggcgct gctaccgatg actcccagga 
> tcccagacgt       960
>      tcagaaccag attctcattg ctttgtatct ttcacgttgt tttcgctgct 
> attggagggt      1020
>      cagttttgtt ttgttttgtt ttacaatgtc agactgccat gttcaagttt 
> taatttcctc      1080
>      atagagtgta tttacagatg cccttttttg tacttttttt tttaattgtg 
> atctattttg      1140
>      gcttaatgtg attaccgctg tattccaaaa aaaaaaaaaa aacaggttcc 
> tgttcacaat      1200
>      acctcatgta tcatctagcc atgcacgagc ctggcaggca ggtgggcggt 
> ctgcctccag      1260
>      ggatcctggg accctgatgg cgatcgtcct gtcatgctgg gcccttcatt 
> tgatctggga      1320
>      catagcatca cagcagtcag ggcacctgga ttgttctgtt atcgatattg 
> tttcttgtag      1380
>      cggcctgttg tgcatgccac catgctgctg gcccgggggg atttgctctg 
> agtctccggt      1440
>      gcatcattta atctgttagg ttctagtgtt ccgtcttgtt ttgtgttaat 
> tacagcattg      1500
>      tgctaatgta aagactctgc ctttgcgaag ccagctgcag tgctgtaggc 
> ccccaagttc      1560
>      cctagcaagc tgccaaacca aaacgggcac caccagctca gctgaggcat 
> cccagccagg      1620
>      caggaccctt gagggccgct gtatccatgg tgatggggtg aggttttggc 
> caaaaggcca      1680
>      aagactggtg gtgggtccac ggaatctgcc ctgtgacatg aaaggctttg 
> aggggctctg      1740
>      gctggtggcc aggttggctt tttgtatttc tggttgacac accatggcgc 
> ttcccagcac      1800
>      agacatgtga ccagcatggt ccaggaaaaa aaaaaagaca aaaaatctag 
> aaaataaaat      1860
>      tggtaaaatc tcagctcact gttgtctgtg ttttctggga acaggagtgg 
> ggtgatgcca      1920
>      cagccatgtg gggtggcatc tctggccctg gcaccaacct gggattccca 
> aggggaaggg      1980
>      tgtatgcaag tgacagccaa cccccccccc gttgcccaat gaaagaccaa 
> tctctcagac      2040
>      atggccctaa accttctcca gcagggcaga ggtgtgcgtt tgaatcaagg 
> gagatcacat      2100
>      tgctttgagt cacactggtc atgggcagcc tttcccataa atactcttct 
> gtagccttaa      2160
>      gtataaatta gacattttag tgtttaaaag cctcctgtgt gagacttaag 
> agttgtcccc      2220
>      aatctccttg tccaggtaat gccatcatgg ttcctacttc caaacaccag 
> ctggcaccaa      2280
>      aggatccctt caactttgca ggacagatcc cggtggtgcg agaacagagt 
> tctctcttct      2340
>      tgacccaaca aaacttccca agcacctcat actaccagcc ctacaacctg 
> ttgtacagcc      2400
>      atctgaatgc gtgtgtggac atccccatcc attccattag aacccctccc 
> cccaacacac      2460
>      accagcaaca ctgcctccag ctagctgacc aaaagtgctt tgaaatggaa 
> tggttttgga      2520
>      acatagagaa agaaaacaca acaaaacaaa ccacacacaa aagctgtggg 
> tttaacctga      2580
>      tgtgggcagg ctgcagggcc ttcaggcaaa aaccagcatc tctctaaaca 
> gagctacaaa      2640
>      ataggaaggt tacaaaaata gaatatatta tgtcactatt tcatccctac 
> cgctgtgtgg      2700
>      ctggtgctgt gaacctgcag gttgttgggg ggagagggca cattaagctg 
> agccctgggg      2760
>      aggggggttg tgccacacgc catgagacca ctagaggtcg cactgaccat 
> ctataaggtt      2820
>      aagaggtctg cccacccctg ggataaagca caggtatcag gtaacagggc 
> tgtaggcact      2880
>      gagcaagcca gggagtgagg ctgagggcct aagctgtggc ttttcagcaa 
> agcagagtac      2940
>      atttctcaac ctaaaaactc ttctacttta acaatggttt gctgtatttt 
> ttttccttcc      3000
>      tttttaaagc aatgtttctt aagctttttt ttaaaaacat ataaaagaat 
> caaaactcct      3060
>      tctcaagact tcccctgtgt taatcctact cttagaacag acaagcacat 
> taatagaaaa      3120
>      ctagttgatt actggggtac agaattctat ttttgtagca ccccctggct 
> ccctactctc      3180
>      agggtgatgc agattctatc tctctctctc tctctttaag acagctttca 
> gatatttttt      3240
>      tctcttttgc ttaaatcaga tagaaaggag aaagattaag gaaaaacaac 
> caacaaagag      3300
>      aacaaaactt cctcttctgg taacaacatg tccccaaggg ggacgtcgtc 
> aggagcaccc      3360
>      gggctggctc cttcctcttt gcgggtgcca ctacttggtg gctcccgcct 
> gcccggtggc      3420
>      cctcagatgt ccacatctcg cacgtcggtg ggcgtgcagg ccagaccagc 
> ctcttcctcc      3480
>      acttccccct cctcctcagt ggccttgggg tcgacgttct gctgggcctg 
> gcgcaggctt      3540
>      gactccagaa gggcttcaat ctgttcctgg caggcacgga ggcagtcctg 
> gagaggcggg      3600
>      cggagatgga gggggtcctt gtttagccag aggccggtgg ccagggcctt 
> gacctgcgag      3660
>      gcaggctttg ctaagagcaa ggcttgagga aactccccaa gccaccccta 
> aatccagtga      3720
>      gagctgccag agactagaaa ggtactgcta ctctctaggt tcctcctccc 
> aggctgtacc      3780
>      ctgaacttcc ccacaaggag cgtctatctc tcataacttt ttgccttggg 
> tggcctctga      3840
>      gagaggacag ctccagcaca ggtagggtct ggaaagcatt tgcccaggaa 
> taagactcat      3900
>      gaactgaagc cctgcctagg caggctgaag ctagggcact gtctatattc 
> ctgaagccag      3960
>      gaggattcct ggggaacacc tgggaagccc ccacattcaa aacttgtgta 
> ttgttccccc      4020
>      tttgtttgat gaacaccatg gctagaggat ggaagggcaa tggccccatt 
> tcacagatgg      4080
>      agaaagtgag gcccaagtag cctagtatgg acccacagac acccttccct 
> ctctgaagcc      4140
>      tgtgggctcc aacctgccca cataccctat tctcagttct caggagcccc 
> agacacttag      4200
>      gggaaggggg ctgcatgctc tacaattgag atatgtagga atggggcacg 
> gggtgtccct      4260
>      gtggctgatg ccaggcaggg cagaacagct gtcacacctg gaagccttcc 
> acatgccagt      4320
>      ggctctgacc tccattgaac ccccaactga agttcaagcc agaactggac 
> ttttgcctgc      4380
>      ctatgccaac ttgtgatgcc cttgaggaaa cattcacggc cagagcccca 
> agcatgatca      4440
>      gctgtactcc ttggcagaaa ggtacagtta gacgtagcac agtctgcctg 
> atgcaaaccc      4500
>      ctctctcaca caaagaaagt tctagaatgt gtaggtctat accagagtcc 
> tttatggatt      4560
>      caatccccaa cgtctgcact gagggagata tggtcctatg ctggctgggc 
> cagaccgggc      4620
>      ttcacatgcc actacccata cacattgcag gggcactgtc accacaccac 
> agccctctat      4680
>      gcctttggga cccatgactc tgggaagaag ctcgtgggga cccagatttg 
> gcacctctca      4740
>      gctccagccc agtcacacag tgccttggca ctgcccacca aggttcccag 
> gcccttgcca      4800
>      gctgtagcct cctttgatga gacttactca ccgggtcaca cttgatgact 
> ctggaaagaa      4860
>      agtgcgttgt gcggtagcag gagaggaagt tgttggggct gcccaggttc 
> aggccttgca      4920
>      tcgcagccac cacgctccca gcagctacca tggagggtgg gttggaaatg 
> aacttcacat      4980
>      ctacagcgag agggacagag acatgcctat gattcagctc tcacccacag 
> cctcggggcc      5040
>      ggtcttcaag cccttccaat ggatgcccac atcaactcta gctcccttgg 
> agacacctaa      5100
>      gtggcactag gtgcacacag tgctgcatct ctagacccca gcacatcgga 
> ggattacggt      5160
>      gtccaggcca gagccttgat gctacctgtc aataaggcct tggctcaaac 
> tttaaaatgc      5220
>      tgcctggcat acacaccggg ttcaatcccc agcacttcca gcaaacatca 
> aggaggggtt      5280
>      ggctatgtcg ccctaagagg atggaatcta tgaaggtgtg gtgctttcac 
> atctgcatcc      5340
>      cagtatttgc gcggctgagg tgggaggcag ggatctctgt ctcttccaga 
> gtcagcctgg      5400
>      cagcacccca aggactagag acacatctca gacacaggag aaagctgtag 
> agatgacagg      5460
>      cccaggttcc tcagaggcca ggctagactc cacagaaggg agttagcctt 
> cccggcttac      5520
>      tgacccaggt tggggaagac atgtgacccc agtccaggaa aacccagtag 
> gaatagactc      5580
>      agagggagct gggaatagcc acctcagatc tccaggccaa ggtccctcat 
> gaggggccct      5640
>      ggagtcttag ggactctcat atgtacatgt cccaactggg aagtagtggg 
> gtgtcatttt      5700
>      aggacttcat ctggggtcac caactccaca cctctcaggt ccactggact 
> cagcatcctg      5760
>      cagttgtatg tcacaccgat ggaatgcctc tccgcataaa cccaccaaag 
> atgagtctga      5820
>      aaactgcttc cctgtcacgt ccaacaaaga aatagtgaca gggacagctg 
> gtcacttggc      5880
>      ctgcgaatca gggcttccag gccagaggag gacacaagaa tgaacagatg 
> tcagctccca      5940
>      tcaatcatct tgtgtgtcac ccagagcctg ggatcaagga ggctggaagg 
> aatgggatca      6000
>      ggaaggcaga gagttgctgt agcgaggtgg ccctctgggg accaccctga 
> gagaacatac      6060
>      agctttggct gttaaaggga tccagcagac aagcaatacc tccaggtggc 
> accaaggaca      6120
>      gttcatgcta gtgagtccag tgaaccaaaa cctggctatg gagtcaagtt 
> caaatcacaa      6180
>      acagcccttt tacagggagt gagactccag ccagcaggac caggagtccc 
> cagccccttc      6240
>      cagagcctgt ttttctccct cccacgggca gtagcaagat ctgttatgtc 
> ctataaggat      6300
>      ccctagctac taacatctgt gtcttcacac tggttgctga tgacataggt 
> gtaccctggc      6360
>      tcagtggcat gtctgacacc tacatacttc attaagttca gtttcccact 
> gtctgtatcc      6420
>      atccacatag cgctctggcc acctgtgtta acaaccccaa ccctagctag 
> cacattgttc      6480
>      aactgcagtc aggaatccag gttggggggg cggtttgcag aagggaagtt 
> atgccttccc      6540
>      atctcctata gggggaaccc ctgtcacaca gacgacagat ctcctggcct 
> tgatgtcagc      6600
>      atctttccat tcacggtgat gtcacactgg ccttttccca aagtggttcc 
> tgtgtgacaa      6660
>      aggagctggt tgctcctaca gagaaacaaa tgctccagac cacagaacac 
> tggcctaccg      6720
>      caggtcacca agctgtcctt tacccccacc tgtattccag gggcacagac 
> aaaggcagta      6780
>      aggagagctg gaagagctga gtccagctgt acccagatat agcgcttact 
> ggttactctg      6840
>      ctggcatcta ggggtcccgg gaggggcaca ctactgccag aactatcctg 
> ggggaggttg      6900
>      tgcctctcca tccccaagtt atctctggga aactctgctg cctctctgaa 
> ggcactttca      6960
>      gctccataaa aggctgcctg gagcttccaa aggctccgct ctcctcagag 
> aaaccccagc      7020
>      cagctgcctc cctgactgcc agcagggcca cccccacccc ttagatcctt 
> ccagcctact      7080
>      gatggccttg ctactcccat ctgccacccc cttgtttggt acccttgggg 
> cgggctcagc      7140
>      actctcggca ggtagttggc aagctagaat ttccaaattc tcaccaccag 
> cagcttagaa      7200
>      acactggcta tggggctgtc agacataaga agatgtcact gagacagcgg 
> gggtgaggtg      7260
>      gaggttgggg gtggggggag atactctacc ggcccttctg acatcacagg 
> ccaaacagct      7320
>      atagcaactg aggtctgatc agggccacag aggaaggggg tcctcaacag 
> gtgggagaac      7380
>      accacacccc ctcaatattg ctaagcctcc tgggtagggt tctcagttag 
> aggtgaggag      7440
>      cagctgtcag aagtagtact gaaaccactc agaagtagca gggttgtcta 
> tgtgtgtggg      7500
>      ttcctgcatg gctgtctacc atgacttatg tcagcctaat ctacctgggg 
> tctggggcca      7560
>      gggagggtcc cttggaggag tcatagggag gttctagttt ctctgtttcc 
> agccaaccct      7620
>      cccaggactc agccaaaaag tactggcctg cagtacccct ggtggggcct 
> ctaagttcct      7680
>      gctctgggac tgtactgtat gtagctcgtg gggctgaggc tggaccattt 
> gtcccatcca      7740
>      tgtaggaacc cctagcaggt ggctcagcct gggagaagct ggtgtgtgtg 
> tgtgtgtgtg      7800
>      ctctatagct cgagctcctt aagaacagag gcaaggcagg aagcctagga 
> aaagaggcaa      7860
>      aaacctcttc agaaagcatg ctgtggccgt accacttcct ggcagtggaa 
> aggttggcac      7920
>      agggaagctg tgtcattctg ttaggtctcc aagatactag ccaagagaat 
> gtgccaccca      7980
>      gtatcatcta tctctccaac aaactatctg caccctgggc tcagaataga 
> tagcaaggaa      8040
>      agaggcctta accccagggg gagtggcaag gagcccgctc ttcctgggaa 
> gaatgggggt      8100
>      ggagccttac ctgtggcaca gagggccaca aaggtctgtg catgcttgcg 
> gatggtctgc      8160
>      ttgttctcat ccgcctctgg cattttggag aggaagtgtt cgatgaaatc 
> gtggggagtc      8220
>      atggcggcca ggttccactt gagcttgttc accagaagca gttccatttg 
> ctgcagagaa      8280
>      tgaggaacac ggtcaaaagg aaggcaggct gattcgagaa ggtctaaaga 
> gttgggtcaa      8340
>      cccgggaccc catacaggta aacaacaaaa tgtgcctgta gaaatactaa 
> ggggacagac      8400
>      tgcggacaaa aagaatctcc caccgccagc gccgtggcct gcacgtcgct 
> agggggcgca      8460
>      caccgcccac atttcagagt ggtttcacca cagacatggt ggggagtcca 
> gtacggaaag      8520
>      agggcgggca cagaggtaga atgggttggc attctgctca ctgccatttc 
> ggtgtcgtgc      8580
>      ggtgcggtgc gggtgccttt cgtggggcag gagatctgtc catggatggc 
> tggatctcct      8640
>      gccatttgca gctcccacca cccagcataa agagggattg tcggtggtgg 
> gttacgtggt      8700
>      taccagcagc tcctcgggcc ggatagagtt gtcagtgtag atgcacaact 
> tctcggcagt      8760
>      caagggaatg gtctccttca tcttagaggc cacgaacatg caggtggccc 
> ccagcagctg      8820
>      caggcggctc ttcttcaagg gctccaggga caggaagcgg tccaggtagt 
> tcatggccag      8880
>      cgggaagacc tcctcttcgc acttctgctc ctcacagacc tgcggggatc 
> cggaccctga      8940
>      ccgtcaacgt gggagggggg cgtcgctcga tacgacccca ttcccttctc 
> ctagattgca      9000
>      cagagaggga ttccggtggc caactccctg ggatgcgctc ctgctccgag 
> ggttcccagt      9060
>      gcccacccac cctgaaactg aaagggaaag tctttgggca gctggcgggg 
> ccggtcgaag      9120
>      caatggtggc cacggagacc ccggtcccct gttgaaatta ggaagccaca 
> agccagagaa      9180
>      ccccaccgcg gggctggcgg ggcgccgggg gctgggcgcc gctcgagcgc 
> acgcgagaca      9240
>      caatggtggc gtcccaggcc gccgcgctgc atttcccaga cgtcatcttt 
> tcaaaaaata      9300
>      tttaaaaata tttaaaaaat aactaggtgc ctaaaaacga cctgaaaata 
> accatcggac      9360
>      gacccttgat ccaagccgag ggtcaggagc tcagtggaca tcggggggtg 
> agctccagca      9420
>      actcaaactc cgggggcccc ccttttgcag ggtgcgggcg ctgtttgcct 
> ctacaagggc      9480
>      attatgcctc actttaaaaa ttattttaaa atattttggg acccctgagt 
> ctcctgctga      9540
>      acatctgaaa atgtgctttt gtccccctcc gcccccagtt tgacctagac 
> aggttcctcc      9600
>      aaatccagaa ccgcacgcac aacagtcagt ctcattgact agggggccac 
> gcgaccttgc      9660
>      agcctggcgt tttctctggg ccaggcagcg tgtgcggggt acccaggtcc 
> gctgtttgaa      9720
>      caaagaatcc cccaccccaa atattcctca cactgtctta tttagtgatt 
> cccggccgcc      9780
>      acgaggcccc tcgtgcctgt cccagcgccc ctactgccgc tccctgccct 
> gcccccaatt      9840
>      attaataaac actttttgct ttgcaataaa ggagcaaaga tggcgcataa 
> tattggcacg      9900
>      agcggccctt gcatacgtgt ccatggatat taatttaaaa atcaaattta 
> tgccccctcc      9960
>      ccccttgagc tggcgaaacg cgcaggggcg gcccccgccg aggcgctgca 
> ggaatggggc     10020
>      acaagcgggg gccacagaag ctcagcctgc accctctgtg gtgtcgctga 
> caccgtcctc     10080
>      cctcgaaggc acccctcccc gactgccctc caccaggaaa aggaattccc 
> atcttcccaa     10140
>      ctcccaaacc ttcctcgttc aaaaggaccc aatctattta ttttgtgaat 
> accgagtcct     10200
>      agcaacgcac ccggaaaact ccgtgacgga agggaagaga agggaggaag 
> atgttggtga     10260
>      tagcaacaag ttgccagggg gtcccaagct agcagcctgt aaagtctctt 
> acctccagca     10320
>      tccaggtggc cacgattttc cgcatggatg gcacaatctc cttctgcacg 
> cacttgaagt     10380
>      aagatacgga gggcgcacag gtctcctccg tcttgagcat ggctcgcagc 
> acccggtcgt     10440
>      tgaggagatt ggtgtcaggg tacgcgcggc ggatggtctc cacttcgcag 
> cacaggagct     10500
>      ggtgttccat ggctcttccg tctggggagg gctgtggtct cggttgggct 
> ccggtggcgg     10560
>      ctgctgacgc gcgctgcctc gcgctgtact gccggtctcc ggagcgcgcg 
> gagtctgtag     10620
>      ctctctgcta ctgcgccgac agccctctgg aggctgcagg actttgcaac 
> ttcaacaaaa     10680
>      ctcccctgta gtccgtgtga cgttactgtt gttaagcaga gatcaaagcc 
> gggcagagaa     10740
>      aagggggagg gggagggccg aggcgggtgc agggggaggg ggctcgggag 
> cagtgagggg     10800
>      ggggggcggc gggggggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnnnn     10860
>      nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 
> nnnnnnnagc     10920
>      ccaaaccctt ccccctcagc cttcgtagat atgcaaatcg ctcggactgc 
> ttctctccaa     10980
>      actgggaaag agcggggcaa gggggagggg ggcttctttc cctaagaggg 
> tcctccgaga     11040
>      cctgtggagg tggggtagtg gcggctctgg acaggaggac agctaggagg 
> gaggccaggc     11100
>      cacacgcaag ccaaggaaga atgtatggaa ggggagcctg ggggtgcaag 
> gacaccctgt     11160
>      tcttaaaccg ggagaatggg tgcgtttccg agtacgccac gaggcaccca 
> caggcggacc     11220
>      cattgcttag aaatcccagc gtccctgtct tctttcaatt tcatcaacac 
> gtgtaaaatt     11280
>      caggaactgt gtaacacccg aagatgccag acgagcccta agctctcgtg 
> caggctccat     11340
>      cctggcgcac tggggtggtt gcaaagggcc agaggggtat ctgaacttta 
> aaggatcccc     11400
>      agcctagcat gcgctcgctc aaaaataaaa taaaaccccg aaaattccag 
> caacagctca     11460
>      agatggtggc cattatttca tctattcctc ctcgctgggg gggtggggtg 
> ggatctgaga     11520
>      tttgtcttca tacagtgacc ggtttatcct ggccagggtc ccccagtatc 
> cccctcctcc     11580
>      actgcaggcg gtttgcccaa gaaaaataaa ccgttgaaga aaaggttgag 
> acacgatagg     11640
>      ctccttccta atttattttt taattaagaa aagtaaatcg ctgcaagtta 
> ttagtcgccc     11700
>      ttccaggaac cagaccaccg gaagcttctt gattggcttc gttgagggtg 
> gtggtgtttc     11760
>      tccaccttta gaattgcagt cttgagttgg gggagggggg gggcggctgg 
> tgagaatcaa     11820
>      gataaacttg tgagccgata aggtgatatt taaagagaat ctatagatgg 
> tcgtggttaa     11880
>      ctgaatggac tcctaagttt ataatttata gattcaaata aaatattttt 
> agaataaagc     11940
>      ggttccacca ccttcgtcca ttatttagtt ccctagtttt ggaaacgttt 
> tcacaatacc     12000
>      cgacttcaag ctaggcgaac tattcacaca catttcccac ggaatacttt 
> cgtgtcccag     12060
>      aagaaactgg taaaggagcg cacagcgtcc aggcggcaca caagacgcaa 
> acccctcacc     12120
>      ttccgagctc atgccttccg ctccccctcc cccgacattg gggtccctaa 
> agtccggacc     12180
>      cttcgggaca gtgattccac tgtagctccg aaggtggtgg gtggcccggg 
> cagagtgccc     12240
>      acgcttgctc tggccacagg ccccgccaag cctgggagcc ttagcctaag 
> cacgagggcg     12300
>      gccaggctgc cttttcattc ataaaatccc taccgggcgg cagtaagcat 
> gatttatggg     12360
>      gctgcgcgct atcacccgcg gctgagtgcc tgcgaactga gcaggctagc 
> ctagccaggg     12420
>      tgcgccacca agggcagcgg ggcataaagg ggctcgccca ccctgcagca 
> cgggctagcg     12480
>      acccgcagcc accccccacc accgccaccg cgggaaagac caggaaactg 
> aaatttgcat     12540
>      gagccaatcc ggactcagtg ctgttactag gcggaccggg cagatctcca 
> cgaggaactt     12600
>      cgttgagctc tgcgctcagg gagaggagca aaagtgcaag tccggtt      
>              12647
> //
> 
>   
> 
> 
> 
> 
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