[Biojava-l] BioSQLSequenceDB question

Thomas Down td2@sanger.ac.uk
Wed, 13 Mar 2002 23:17:09 +0000


On Wed, Mar 13, 2002 at 11:10:26PM -0000, Matthew Pocock wrote:
> > Hi Thomas,
> >
> > One quick question, was the ids() method designed to return all the
> > bioentry ids in a database without regard to the biodatabase chosen (as
> > it currently does) or is this an error and in fact should only return
> > all the bioentry ids for a particular biodatabase.
> 
> Just the entries for a single biodatabase (multiple biodatabase instances
> per BioSQL database) - that would be consistent with its normal usage in
> BioJava. Thomas?

Yep, that's the expected behaviour.

There was a little bug here (or at least a throwback
to the days before BioJava-BioSQL supported multiple namespace).
It's fixed now -- thanks Simon for pointing that out.

    Thomas.