[Biojava-l] Demos/seqviewer fails...

Geetha Vasudevan geethav@incyte.com
Fri, 25 Jan 2002 09:09:42 -0800


The x-window pops up though. thanks.

[98]% java seqviewer/BeadDemo ./seqviewer/test.fa
java.io.IOException: Premature end of stream or missing end tag '//' for
EMBL
        at org.biojava.bio.seq.io.EmblLikeFormat.readSequence
(EmblLikeFormat.java:187) (pc 252)
        at org.biojava.bio.seq.io.StreamReader.nextSequence
(StreamReader.java:100) (pc 41)
rethrown as org.biojava.bio.BioException: Could not read sequence
        at org.biojava.bio.seq.io.StreamReader.nextSequence
(StreamReader.java:103) (pc 64)
        at seqviewer.BeadDemo.main       (BeadDemo.java:137)     (pc 61)



[99]% more ./seqviewer/test.fa
>blah blah
ACGTACGTAGGTGCAAT