[Biojava-l] Re: RNA secondary structure prediction

Karen Petrosyan karen@phys.latech.edu
Tue, 12 Feb 2002 17:40:59 -0600 (CST)

Well, I guess the answer is negative. I've found only
RNATools/Feature classes with an interface. Those
classes do not contain what I'm looking for.
Do I miss anything?

On Sun, 10 Feb 2002, Karen Petrosyan wrote:

> Hi biojava developers:
> I'm wondering if biojava contains any RNA secondary
> structure prediction. I'm looking for a Java class(es)
> that would take a sequence as input and will then
> output a secondary structure being able to predict
> e.g. stem-loops.
> I'll appreciate any info/comments.
> Best regards,
> Karen