[Biojava-l] BLAST output parsing

Kalle Näslund kalle.naslund@genpat.uu.se
Tue, 20 Aug 2002 22:13:00 +0200

satyanarayana pasupuleti wrote:

> Hello:
> I am wondering if there are any examples in the documentation that 
> would help me in parsing BLAST output? I appreciate any kind of help 
> in this regard.

There is a tutorial about how to parse Blast results with biojava, 
that gives a fairly detailed explanation on how to parse Blast like 
results. You can also find some small sample applications in the
demo directory of the biojava sourcetree.

I would recomend you to first read the tutorial, and then look at the 
demo examples included in the biojava source tree.

mvh Kalle

> Thanks a lot,
> --satya
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