[Biojava-l] small change to changeable, big change to lots of files

Schreiber, Mark mark.schreiber@agresearch.co.nz
Fri, 26 Apr 2002 09:51:00 +1200


Much as I would like to blame Matthew for the Distribution Serialization
problem unfortunately the problem comes from the OrderNDistributions not
behaiving well during serialization. Somehow even though
SimpleDistribution is serializable the SimpleDists in the OrderNDist
seem to go AWOL. I haven't yet found the source of the problem, I'll
keep looking but if there are any volunteers that want to gain instant
fame and recognition by sorting this out then go for it!

- Mark

> -----Original Message-----
> From: Thomas Down [mailto:td2@sanger.ac.uk] 
> Sent: Thursday, 25 April 2002 8:53 p.m.
> To: Keith James
> Cc: Matthew Pocock; Biojava-l
> Subject: Re: [Biojava-l] small change to changeable, big 
> change to lots of files
> 
> 
> On Wed, Apr 24, 2002 at 09:57:15PM +0100, Keith James wrote:
> > 
> > Most of the problem seems to be the ChangeSupport constructors 
> > chaining through with a hard-coded null value for a Set which gets 
> > passed to the HashSet constructor. I've replaced this with 
> > Collections.EMPTY_SET for now and there are 7 tests still failing, 
> > mostly in feature projection.
> 
> I've fixed the projection-related test failures (although not 
> yet done a great deal of `real world' testing).  The only 
> remaining test failure is in distribution serialization.  I 
> think this is unrelated to Matt's changes.
> 
> > Beer owed! ;)
> 
> Hear hear!
> 
>    Thomas.
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> Biojava-l mailing list  -  Biojava-l@biojava.org 
> http://biojava.org/mailman/listinfo/biojava-l
> 
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