[Biojava-l] Frames

[Mark Schreiber]

Hi-

I have committed classes for dealing with frames, see Frame, FramedFeature
and SimpleFramedFeature. Also nescessary changes made to FeatureImpl and a
FrameFilter added to FeatureFilter.

GFFEntrySet now also adds FramedFeatures when it annotates a Sequence.
GFFRecords still store frame info as a int. This could be changed but i
was reluctant to do this as something might get broken.

Mark

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Mark Schreiber			Ph: 64 3 4797875
Rm 218				email mark_s@sanger.otago.ac.nz
Department of Biochemistry	email m.schreiber@clear.net.nz
University of Otago		
PO Box 56
Dunedin
New Zealand
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