[Biojava-l] GAME XML

[Chris Mungall]

Crossposting to bioxml from biojava...

On Thu, 4 May 2000 biojava-l-admin@biojava.org wrote:

> Message: 2
> Date: Thu, 04 May 2000 11:03:42 +0100
> From: Matthew Pocock <mrp@sanger.ac.uk>
> Organization: The Sanger Center
> To: "biojava-l@biojava.org" <biojava-l@biojava.org>
> Subject: [Biojava-l] Game XML
> 
> Dear all,
> 
> Is GameXML widely used? Would it be good to add a game read/write module
> to org.biojava.bio.seq.io?

We use it extensively within FlyBase/BDGP. We also used it for
transferring the annotated drosophila genome data between
BDGP/Celera/genbank.

A biojava parser would be great - we already have a parser for our own
java objects, which you're welcome to look at.

I'd say hold off for a short while - on bioxml-dev we're discussing some
changes to GAME since some of the tags were deemed a little confusing for
some people at first.

> Matthew
> 
> --
> Joon: You're out of your tree
> Sam:  It wasn't my tree

------------------------------------------------------------------
Chris Mungall            	Berkeley Drosophila Genome Project
cjm@fruitfly.berkeley.edu	http://www.fruitfly.org

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