[Biojava-l] bytecode generator - test example is broken.

Mike May Mike May" <may@dial.pipex.com
Fri, 21 Apr 2000 09:37:55 +0100


This is a multi-part message in MIME format.

------=_NextPart_000_0085_01BFAB75.4553B3E0
Content-Type: multipart/alternative;
	boundary="----=_NextPart_001_0086_01BFAB75.4553B3E0"


------=_NextPart_001_0086_01BFAB75.4553B3E0
Content-Type: text/plain;
	charset="iso-8859-1"
Content-Transfer-Encoding: quoted-printable

Hi

The latest version (1.1) in the WebCVS of test.MakeHelloWorld.java is =
not consistent with the latest version (1.10) of =
org.biojava.utils.bytecode.GeneratedCodeClass.  The constructor of =
GeneratedCodeClass expects an array of CodeClass whereas MakeHelloWorld =
passes a Set.  The same applies to createMethod().  I expect it was =
broken by the 1.6 change to GeneratedCodeClass.

I attach a corrected version of MakeHelloWorld.java.  Its all yours if =
you want it.

Would you kindly pass on my thanks to thomasd for the bytecode utility =
which is tremendously useful.

Regards
Mike May

------=_NextPart_001_0086_01BFAB75.4553B3E0
Content-Type: text/html;
	charset="iso-8859-1"
Content-Transfer-Encoding: quoted-printable

<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<HTML><HEAD>
<META http-equiv=3DContent-Type content=3D"text/html; =
charset=3Dwindows-1252">
<META content=3D"MSHTML 5.50.4134.600" name=3DGENERATOR></HEAD>
<BODY bgColor=3D#ffffff>
<DIV><FONT size=3D2>Hi</FONT></DIV>
<DIV><FONT size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>The latest version (1.1) in the WebCVS of=20
test.MakeHelloWorld.java is not consistent with the latest version =
(1.10) of=20
org.biojava.utils.bytecode.GeneratedCodeClass.&nbsp; The constructor of=20
GeneratedCodeClass expects an array of CodeClass whereas MakeHelloWorld =
passes a=20
Set.&nbsp; The same applies to createMethod().&nbsp; I expect it was =
broken by=20
the 1.6 change to GeneratedCodeClass.</FONT></DIV>
<DIV><FONT size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>I attach a corrected version of =
MakeHelloWorld.java.&nbsp; Its=20
all yours if you want it.</FONT></DIV>
<DIV><FONT size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>Would you kindly pass on my thanks to thomasd for =
the bytecode=20
utility which is tremendously useful.</FONT></DIV>
<DIV><FONT size=3D2></FONT>&nbsp;</DIV>
<DIV><FONT size=3D2>Regards</FONT></DIV>
<DIV><FONT size=3D2>Mike May</FONT></DIV></BODY></HTML>

------=_NextPart_001_0086_01BFAB75.4553B3E0--

------=_NextPart_000_0085_01BFAB75.4553B3E0
Content-Type: text/java;
	name="MakeHelloWorld.java"
Content-Transfer-Encoding: base64
Content-Disposition: attachment;
	filename="MakeHelloWorld.java"
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------=_NextPart_000_0085_01BFAB75.4553B3E0--