[Biojava-dev] release notes for 4.2.2

Andreas Prlic andreas at sdsc.edu
Tue Jun 28 02:18:28 UTC 2016


Hi Michael,

I am just off for another 10 days of paternity leave. I can hook you up
with access to our jenkins instance, when I am back and we can configure
the same single-button release setup that we now have for biojava/biojava .

A

On Mon, Jun 27, 2016 at 12:32 PM, Michael Heuer <heuermh at gmail.com> wrote:

> Hello Andreas,
>
> For
>
> https://github.com/biojava/biojava-legacy/pull/34
> https://github.com/biojava/biojava-legacy/issues/36
>
> and a bump of dependency versions we may want to cut a 1.9.3 release of
> biojava-legacy before September 1st.
>
> Since these releases happen infrequently it's fine to keep doing them
> manually; if you come up with a way to push docs to the website, please let
> me know.
>
>    michael
>
>
>
> On Wed, Jun 15, 2016 at 11:09 AM, Andreas Prlic <andreas at sdsc.edu> wrote:
>
>> You are right, I set up our internal jenkins server so it can create
>> biojava releases upon pressing a button. Should make it easier/faster to
>> perform releases from now on.
>>
>> Will take a look how to upload javadocs and push to the website
>> automatically.
>>
>> A
>>
>> On Wed, Jun 15, 2016 at 2:37 AM, Spencer Bliven <spencer.bliven at gmail.com
>> > wrote:
>>
>>> Thanks for making the 4.2.2 release! (I suspect Andreas was behind that,
>>> although git credits Mr. Jenkins.) It looks like the new release protocol
>>> is working nicely. Can Jenkins also generate the javadocs and push to the
>>> biojava.github.io repo?
>>>
>>> For the release notes, here are the major changes I'm aware of:
>>>
>>>    - CE-Symm features and bug fixes
>>>       - Better data structures for symmetry axes (particularly for
>>>       hierarchical symmetry)
>>>       - Fix bug with symmetry axis positioning
>>>       - Optimization includes all symmetry repeats for hierarchical
>>>       symmetry
>>>    - More post-translational modifications, including new glycans and
>>>    chromophores
>>>
>>> It was a quick patch, so I count only 5 contributors.
>>>
>>> -Spencer
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> biojava-dev mailing list
>>> biojava-dev at mailman.open-bio.org
>>> http://mailman.open-bio.org/mailman/listinfo/biojava-dev
>>>
>>
>>
>>
>> _______________________________________________
>> biojava-dev mailing list
>> biojava-dev at mailman.open-bio.org
>> http://mailman.open-bio.org/mailman/listinfo/biojava-dev
>>
>
>


-- 
-----------------------------------------------------------------------
Dr. Andreas Prlic
RCSB PDB Protein Data Bank
Technical & Scientific Team Lead
University of California, San Diego

Editor Software Section
PLOS Computational Biology

BioJava Project Lead
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