[Biojava-dev] deploying snapshots

[Andreas Prlic]

Hi Michael,

no, cloudportal and portal are not the same. BioJava's hosting has been
moved to cloudportal, an AWS instance. We have to set you up with some new
ssh keys, if you can't log into that one...

HOWEVER: I have a cruisecontrol instance running which should automatically
push snapshot builds to our maven repo. It is currently still listening to
the old SVN site. As soon as I have a free moment I'll migrate it to use
github instead. Every commit (that passes the unit tests) should be
reflected by a new snapshot. I'll also talk to our admin to get that server
publicly accessible...

Andreas


On Fri, Apr 19, 2013 at 2:36 PM, Michael Heuer <heuermh at gmail.com> wrote:

> Hello,
>
> I tried to deploy 1.8.3-SNAPSHOT of biojava-legacy this afternoon
>
> $ mvn deploy
> [INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @
> biojava-legacy ---
> Downloading: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/maven-metadata.xml
> Downloaded: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/maven-metadata.xml
> (602 B at 0.3 KB/sec)
> Uploading: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/biojava-legacy-1.8.3-20130419.213250-6.pom
> Uploaded: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/biojava-legacy-1.8.3-20130419.213250-6.pom
> (9 KB at 4.2 KB/sec)
> Downloading: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/maven-metadata.xml
> Downloaded: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/maven-metadata.xml
> (599 B at 0.6 KB/sec)
> Uploading: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/maven-metadata.xml
> Uploading: scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/org/biojava/biojava-legacy/maven-metadata.xml
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Reactor Summary:
> [INFO]
> [INFO] biojava-legacy .................................... FAILURE [6.444s]
> [INFO] bytecode .......................................... SKIPPED
> [INFO] core .............................................. SKIPPED
> [INFO] alignment ......................................... SKIPPED
> [INFO] biosql ............................................ SKIPPED
> [INFO] blast ............................................. SKIPPED
> [INFO] das ............................................... SKIPPED
> [INFO] sequencing ........................................ SKIPPED
> [INFO] gui ............................................... SKIPPED
> [INFO] phylo ............................................. SKIPPED
> [INFO]
> ------------------------------------------------------------------------
> [INFO] BUILD FAILURE
> [INFO]
> ------------------------------------------------------------------------
> [INFO] Total time: 7.081s
> [INFO] Finished at: Fri Apr 19 16:32:54 CDT 2013
> [INFO] Final Memory: 10M/135M
> [INFO]
> ------------------------------------------------------------------------
> [ERROR] Failed to execute goal
> org.apache.maven.plugins:maven-deploy-plugin:2.7:deploy
> (default-deploy) on project biojava-legacy: Failed to deploy metadata:
> Could not transfer metadata
> org.biojava:biojava-legacy:1.8.3-SNAPSHOT/maven-metadata.xml from/to
> biojava-maven-repo
> (scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/
> ):
> Error occurred while deploying
> 'org/biojava/biojava-legacy/1.8.3-SNAPSHOT/maven-metadata.xml' to
> remote repository:
> scp://
> portal.open-bio.org/home/websites/biojava.org/html/static/download/maven/:
> SCP terminated with error: 'scp:
> /home/websites/
> biojava.org/html/static/download/maven/org/biojava/biojava-legacy/1.8.3-SNAPSHOT/maven-metadata.xml
> :
> Permission denied' -> [Help 1]
>
>
> Are scp://portal.open-bio.org and scp://cloudportal.open-bio.org the
> same machine?  Or is there something else that has changed since I
> deployed biojava-legacy 1.8.2 snapshots and release?
>
>    michael
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>



-- 
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Dr. Andreas Prlic
Senior Scientist, RCSB PDB Protein Data Bank
University of California, San Diego
(+1) 858.246.0526
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