[Biojava-dev] [Biojava-l] From : Chromatagraph reading in BioJava3?

[Andreas Prlic]

If this is still a common file format, it would be great if you could
port this for the 3.0.4 release!

Andreas

On Mon, Mar 12, 2012 at 10:56 PM, Hannes Brandstätter-Müller
<biojava at hannes.oib.com> wrote:
> On Mon, Mar 12, 2012 at 16:04, Nick England <nickengland at gmail.com> wrote:
>> Hello all,
>>
>> I am trying to read some .scf files into BioJava3. I have found the
>> example code for 1.3
>> (http://biojava.org/wiki/BioJava:Cookbook:SeqIO:ABItoSequence) but I
>> can't find any classes in the 3.0 API which look at all related to
>> those ones. Is it possible, or should I downgrade to 1.3 if I want to
>> be able to read .scf files?
>>
>> Thanks,
>>
>> Nick
>
> Should we port that to 3.0.x after the next release? Or for 3.0.3?
> Sounds like another nice addition to org.biojava3.genome.parsers -
> I'll take a look at it to see what info is stored in these scf files.
>
> Hannes
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-- 
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Dr. Andreas Prlic
Senior Scientist, RCSB PDB Protein Data Bank
University of California, San Diego
(+1) 858.246.0526
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