[Biojava-dev] [Bug 2854] Selection of protein alphabet is hardcoded in ProteinTools class

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue May 11 01:31:33 UTC 2010


http://bugzilla.open-bio.org/show_bug.cgi?id=2854





------- Comment #2 from kmjuris at gmail.com  2010-05-10 21:31 EST -------
Created an attachment (id=1500)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=1500&action=view)
Proposed fix to ProteinTools

The proposed ProteinTools fix does not hardcode the selection of the
ProteinTools.getTAlphabet() when calling createProtein().  Rather, the fix
determines the appropriate alphabet based on theProtein string input.


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