[Biojava-dev] sequence-core tests currently do not compile

Andy Yates ayates at ebi.ac.uk
Wed Jan 20 09:55:31 UTC 2010


Hmmm interesting. That should have all been commented out I thought. I  
will fix & commit back
On 20 Jan 2010, at 00:52, Michael Heuer wrote:

>
> Module sequence-core tests currently do not compile
>
> [ERROR] Failed to execute goal
> org.apache.maven.plugins:maven-compiler-plugin:2.0.2:testCompile
> (default-testCompile) on project sequence-co
> re: Compilation failure: Compilation failure:
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[8,7]
> class DNATests
> is public, should be declared in a file named DNATests.java
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[45,9]
> cannot find sy
> mbol
> symbol  : class Sequence
> location: class org.biojava3.core.DNATests
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[45,28]
> cannot find s
> ymbol
> symbol  : class DNACompound
> location: class org.biojava3.core.DNATests
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[40,17]
> cannot find s
> ymbol
> symbol  : class BadSequence
> location: class org.biojava3.core.DNATests
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[12,15]
> getSeq(java.l
> ang.String) in org.biojava3.core.DNATests cannot be applied to ()
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[18,15]
> getSeq(java.l
> ang.String) in org.biojava3.core.DNATests cannot be applied to ()
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[24,15]
> getSeq(java.l
> ang.String) in org.biojava3.core.DNATests cannot be applied to ()
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[37,16]
> cannot find s
> ymbol
> symbol  : variable toString
> location: class java.lang.String
>
> C:\cygwin\home\heuermh\working\biojava-live-trunk\sequence\sequence- 
> core\src\test\java\org\biojava3\core\DnaTests.java:[47,15]
> cannot find s
> ymbol
> symbol  : class DNASequence
> location: class org.biojava3.core.DNATests
>
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