[Biojava-dev] biojava SVN

[Richard Holland]

Could a small MVN repo be set up at OBF?

On 30 Apr 2010, at 16:48, Andy Yates wrote:

> Does anyone know how hard it would be to get these into the public maven repository? The EBI repo is all well & good but updating it relies on BioJava always having a committer at the EBI. Now I know that is a very likely statement but is it something we can rely on?
> 
> Andy
> 
> On 30 Apr 2010, at 16:44, Andreas Prlic wrote:
> 
>> Hi,
>> 
>> The BioJava SVN has not been fully compiling ever since the Hackathon. I
>> guess things were quite in flux the last months and it is now time to make
>> sure SVN fully compiles again.  There is a few things we need to figure out
>> in order for that:
>> 
>> * Jar files for libraries that are not in a public Maven repository. Jules :
>> at some point you indicated that we might be able to get such jar files
>> hosted by the EBI Maven repository. Do you think that is still an
>> possibility and could you get a few libraries into that? In particular that
>> would be Jmol, Astex, and probably one or two other Jar files. That would
>> make the BioJava checkout process much smoother and not require a developer
>> to manually install jars for full functionality.
>> 
>> * We have a couple of modules that are fragmented and broken. This is due to
>> historic leftovers from when we started the re-factoring process. If all the
>> functionality has been moved into the new biojava3-core module, I would vote
>> for removing the modules starting with sequence*
>> 
>> Andreas
>> 
>> 
>> -- 
>> -----------------------------------------------------------------------
>> Dr. Andreas Prlic
>> Senior Scientist, RCSB PDB Protein Data Bank
>> University of California, San Diego
>> (+1) 858.246.0526
>> -----------------------------------------------------------------------
>> _______________________________________________
>> biojava-dev mailing list
>> biojava-dev at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
> 
> -- 
> Andrew Yates                   Ensembl Genomes Engineer
> EMBL-EBI                       Tel: +44-(0)1223-492538
> Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
> Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/
> 
> 
> 
> 
> 
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev

--
Richard Holland, BSc MBCS
Operations and Delivery Director, Eagle Genomics Ltd
T: +44 (0)1223 654481 ext 3 | E: holland at eaglegenomics.com
http://www.eaglegenomics.com/