[Biojava-dev] [Bug 2244] uniprot files do not load

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Mar 21 19:07:57 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2244


holland at ebi.ac.uk changed:

           What    |Removed                     |Added
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                 CC|                            |holland at ebi.ac.uk
             Status|NEW                         |ASSIGNED




------- Comment #1 from holland at ebi.ac.uk  2007-03-21 15:07 EST -------
I don't understand what the problem is. If I download UniProt files for the 3
accessions you mention from the official UniProt website at
http://www.pir.uniprot.org/ then I get files that parse correctly.

The date lines shown in your example are not in UniProt format. They are EMBL
format date lines.

Where are you getting your UniProt files from? This sounds like a bug in the
software at the site you are getting from, not a bug with BioJava.

Please let me know where you are getting the files from and I will investigate
a bit more.


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