[Biojava-dev] [Bug 2309] New: Digest.addDigestFeatures() does not work

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2309

           Summary: Digest.addDigestFeatures() does not work
           Product: BioJava
           Version: unspecified
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: major
          Priority: P2
         Component: bio
        AssignedTo: biojava-dev at biojava.org
        ReportedBy: brunner at imp.ac.at


org.biojava.bio.proteomics.Digest not functional:

Digesting protein sequences yields only one fragment (Feature). The problem
seems to be in the Feature.compare() function. Individual peptides are not
distinguished by the compare() function, leaving only one fragment in the
features TreeMap.

I will provide a patch in the next the if I can make it work.


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