[Biojava-dev] Question regarding org.biojava.bio.seq.db.WebSequenceDB

Valdemaras Repšys debesis at gmail.com
Fri Jul 21 08:32:47 UTC 2006


Hi,
I'm using the org.biojava.bio.seq.db.WebSequenceDB.getSequence(String id)
method.

Every time i invoke it it prints a few lines to System.err and these lines
are not errors:
query is
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=text&db=protein&uid=15625528&dopt=FASTA
got data from
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=text&db=protein&uid=15625528&dopt=FASTA

My application uses this method a lot and the log becomes stuffed with these
not important messages..

Could someone, please, remove these two System.err.println lines from the
method?
Or i can do it myself if you give me a cvs account.

By the way, cvs currently is not working: cvs [login aborted]: connect to
code.open-bio.org(207.154.17.72):2401 failed: Connection timed out. But I
hope it' temprary.

Thanks,
Valdemaras Repšys




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