[Biojava-dev] Question about biojava

Michael Griffith mg at base-pair.com
Wed Aug 4 10:18:26 EDT 2004


Isabelle, 

Using BioJava + BioSQL you can read the Genebank flat files posted to the
NCBI ftp site.  Using high level abstractions, you can easily read the files
into memory, or better yet into a biosql database where you can manipulate
the data.

MG 

On 8/4/04 9:12 AM, "## Isabelle Bourgait ##" <bourgait at orleans.inra.fr>
wrote:

> Dear developers,
> 
> I'm engineer at INRA (France) and I would like to known if it's possible
> to extract information about EST from the NCBI server with biojava
> just like we can do with bioperl (Bio::DB::Query//Genbank).
> 
> Best regards,
> 
> 
> Isabelle BOURGAIT
> 
> 
> 
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at biojava.org
> http://biojava.org/mailman/listinfo/biojava-dev
> 



More information about the biojava-dev mailing list