[Biojava-dev] BioJava Nightly Build + BioSQL/MySQL problem...

Thomas Down td2 at sanger.ac.uk
Tue Aug 3 13:37:39 EDT 2004


On 3 Aug 2004, at 18:20, Michael Griffith wrote:

> Michael,
>
> Well, that could be the problem?  I don't have a table called 
> ontology_term.
> I do have a table called ontology that looks like this:
>
>   4   __core_ontology   BioSQL core ontology (imported by BioJava)
>   5   __biojava_guano   Namespace for old, but still useful, shit 
> imported
> from ontology-less BioJava data models
>
> The version of my schema was created from:
> biosql-schema/sql/biosqldb-mysql.sql Version 1.38.  Is this correct?

The table formerly known as ontology_term is now just called "term" -- 
could you take a look at that?

      Thomas.



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