[Biojava-dev] RE: Flyweight Ontologies?

Schreiber, Mark mark.schreiber at agresearch.co.nz
Mon Nov 10 16:41:32 EST 2003


 >>I think the LSID people would point out at this point that
> >>LSIDs should 
> >>be permanent, and immutable, always resolving to the same (or 
> >>equivalent) entity. If we substitute URN for LSID, then I'm happy - 
> >>urn:biojava: or something - I think we're meant to use 
> >>urn:x-biojava as 
> >>we've not registered the biojava namespace.
> >>    
> >>
> >
> >I'm not sure I follow. My intention would be that they do always 
> >resolve to the same object. Although I haven't looked too 
> much into the 
> >ontology package so I'm not sure if this is possible.
> >
> A particular LSID should resolve for all eternity to the same 
> entity, so 
> by using LSIDs for things like ontologies within a running 
> application, 
> we are implicitly contracting ourselves to have that data 
> available /for 
> ever/, even if it is working data or intermediate results, or 
> if we know 
> we will be changing the schema next week. URNs don't have 
> this restriction.
 
Wouldn't the core Ontology come under that categorie? If not, what form do you think the URN should take? Is there a need for each Term to know which Triple it belongs too or which Ontology?

- Mark
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